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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTGGGCCGTGTCAACGAGCAGCCCGTGCTGCCCTTCAACGCCTACGGCACCCTGGCCTGGGCGCGCAATGAGTTTGAGAACAACAGCGCCTCCAGCCAGgtggggcctgtgccggcggctgcgggtctagcaccagtgggaaagtatggagctacgaggcgtgctggttcctgcatgcagccttgacaaagactgcgtgtcttctacagtgtagcacgtgcccccccccgctagcctcaccgccggccccgcgtcgcctacgcgtcccccgcccgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP04524
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15692003|gb|BI716308.1|BI716308
EST:     CCCTGGCCTGGGCGCGCAATGAGTTTGAGAACAACAGCGCCTCCAGCCAG                         GTGTTCTTCCTGCTCAAGGAGAGCGAGCTGACGCCCACCGGCTCCAACCTG
genomic: CCCTGGCCTGGGCGCGCAATGAGTTTGAGAACAACAGCGCCTCCAGCCAGgtggggcctg ... ccgcccgcagGTGTTCTTCCTGCTCAAGGAGAGCGAGCTGACGCCCACCGGCTCCAACCTG
EST: gi|16436444|gb|BM001664.1|BM001664
EST:     ACAACAGCGCCTCCAGCCAG                         GTGTTCTTCCTGCTCAAGGAGAGCGAGCTGACGCCCACCGGCTCCAACCTG
genomic: ACAACAGCGCCTCCAGCCAGgtggggcctg ... ccgcccgcagGTGTTCTTCCTGCTCAAGGAGAGCGAGCTGACGCCCACCGGCTCCAACCTG
EST: gi|14229849|gb|BG848665.1|BG848665
EST:     CCCTGGCCTGGGCGCGCAATGAGTTTGAGAACAACAGCGCCTCCAGCCAG                         GTGTTCTTCCTGCTCAAGGAGAGCGAGCTGACGCCCACCGGCTCCAACCTG
genomic: CCCTGGCCTGGGCGCGCAATGAGTTTGAGAACAACAGCGCCTCCAGCCAGgtggggcctg ... ccgcccgcagGTGTTCTTCCTGCTCAAGGAGAGCGAGCTGACGCCCACCGGCTCCAACCTG