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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGGCATGTTCAACAAGGGCCGCAACAACACCGACGTGCACTACCTGTGTCCGGACTGCCTGGCGGTGGGCTACGAGCGGGGCCAGCGGCAAAAAACGGAGgtgagctgaggccgacgtgtatagccatcagactgcaaggcaatgaccaactgcacgccaacgtgtgcgcgtacgtgtaaggttgcgggttgcagttactaggcccctgagcacataccgttgtattgtcgcatcccgtgggacag

Basic information

species Chlamydomonas reinhardtii
transcript EDP04521
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10785342|gb|AV642014.1|AV642014
EST:     CGGACTGCCTGGCGGTGGGCTACGAGCGGGGCCAGCGGCAAAAAACGGAG                         GTGCGGCCGCAAGCCATGCTCGAAGCCAAGGACTTGCCGACCAGTCGGCTC
genomic: CGGACTGCCTGGCGGTGGGCTACGAGCGGGGCCAGCGGCAAAAAACGGAGgtgagctgag ... cgtgggacagGTGCGGCCGCAAGCCATGCTCGAAGCCAAGGACTTGCCGACCAGTCGGCTC
EST: gi|10791792|gb|AV629158.1|AV629158
EST:     CGGACTGCCTGGCGGTGGGCTACGAGCGGGGCCAGCGGCAAAAAACGGAG                         GTGCGGCCGCAAGCCATGCTCGA
genomic: CGGACTGCCTGGCGGTGGGCTACGAGCGGGGCCAGCGGCAAAAAACGGAGgtgagctgag ... cgtgggacagGTGCGGCCGCAAGCCATGCTCGA