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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCCCGGTTTGCATGATTCGCTTTTTCGAGgtgtgtggagggagggggagcacgaggatgcggacgaggacaagggcgcggggacacgggggtcgtaggcaggcagcggcacggtaccagctgctgacaaggcccccctgttttacttgatggcattgcatgtttcagttcaaattcgtagtcttttttgctcgtatctgtgtgcatctcgtgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP04519
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23360439|gb|BU648259.1|BU648259
EST:     GGCCCGGTTTGCATGATTCGCTTTTTCGAG                         GGGCCAGCTGGCATGGTCGACCGCAG
genomic: GGCCCGGTTTGCATGATTCGCTTTTTCGAGgtgtgtggag ... tctcgtgcagGGGCCAGCTGGCATGGTCGACCGCAG
EST: gi|23358669|gb|BU646489.1|BU646489
EST:     GGCCCGGTTTGCATGATTCGCTTTTTCGAG                         GGGCCAGCTGGCATGGTCGACCGCAG
genomic: GGCCCGGTTTGCATGATTCGCTTTTTCGAGgtgtgtggag ... tctcgtgcagGGGCCAGCTGGCATGGTCGACCGCAG
EST: gi|23358668|gb|BU646488.1|BU646488
EST:     GGCCCGGTTTGCATGATTCGCTTTTTCGAG                         GGGCCAGCTGGCATGGTCGACCGCAG
genomic: GGCCCGGTTTGCATGATTCGCTTTTTCGAGgtgtgtggag ... tctcgtgcagGGGCCAGCTGGCATGGTCGACCGCAG