1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GAGCCCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTGgtgggtgggcagcgcacacaggaaggtggatgctgcatggctgctaggacatgccagtggctgcggaggatggagaaagcgaggattggggctgggtgtg...
species | Chlamydomonas reinhardtii |
transcript | EDO99098 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTG GCTACGGTGGTGCTGTCCGNCCCCGCCACCGTCTACAGCCACGACCCCAAGEST: gi|161805684|gb|FC093652.1|FC093652
genomic: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTGgtgggtgggc ... actcctctagGCTACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAG
EST: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAGCTG GCCACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAGEST: gi|161818894|gb|FC108814.1|FC108814
genomic: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTGgtgggtgggc ... actcctctagGCTACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAG
EST: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAGCTG GCCACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAGEST: gi|161799213|gb|FC082472.1|FC082472
genomic: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTGgtgggtgggc ... actcctctagGCTACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAG
EST: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAGCTG GCCACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAGEST: gi|161803118|gb|FC091889.1|FC091889
genomic: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTGgtgggtgggc ... actcctctagGCTACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAG
EST: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAGCTG GCCACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAGEST: gi|15696714|gb|BI721019.1|BI721019
genomic: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTGgtgggtgggc ... actcctctagGCTACGGTGGTGCTGTCCGCCCCCGCCACCGCCTACAGCCACGACCCCAAG
EST: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTG GCTACGGTGGTGCTGTCNNCCCCCGCCACCGCCT
genomic: CCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTGgtgggtgggc ... actcctctagGCTACGGTGGTGCTGTCCGCCCCCGCCACCGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGCCCATCCTGTTCCGCGGTGTTGCGGCGGTGGTCAGCCCCGACTCAGAACTGgtgggtgggcagcgcacacaggaaggtggatgctgcatggctgctaggacatgccagtggctgcggaggatggagaaagcgaggattggggctgggtgtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcacaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tggatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tggctgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgggtgt