1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtgcgtgtgttagcgagcgagcgcgacatgatgggaatcgcaggcggccgctgtttggcaaatgagggatcggttccgttgggtggatgggggctgcgctatctgcagcggtggaagggcgtatgcaaaggtcacaagcaactcttcctgacccaatactgctccttcctggttgttggtgcgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGTTCGACGCCAACGCCAACACCCAGACCGTGCCCATCACCGCCATCCCCG
species | Chlamydomonas reinhardtii |
transcript | EDO98586 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|10778626|gb|AV635306.1|AV635306
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161791377|gb|FC077974.1|FC077974
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161816099|gb|FC103794.1|FC103794
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161795111|gb|FC078255.1|FC078255
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCA-G GCCAANGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTEST: gi|161806004|gb|FC089526.1|FC089526
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGT
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|22062636|gb|BQ814877.1|BQ814877
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161808945|gb|FC094390.1|FC094390
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161808380|gb|FC098453.1|FC098453
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161815736|gb|FC101851.1|FC101851
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161797540|gb|FC086028.1|FC086028
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161803417|gb|FC093046.1|FC093046
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161792900|gb|FC082154.1|FC082154
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161812927|gb|FC095129.1|FC095129
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161822387|gb|FC106808.1|FC106808
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|9028128|gb|BE238168.1|BE238168
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161810630|gb|FC094209.1|FC094209
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161808389|gb|FC098462.1|FC098462
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161792854|gb|FC082108.1|FC082108
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161791664|gb|FC078299.1|FC078299
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|15372888|gb|BI532314.1|BI532314
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: GATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|49459990|gb|BP087903.1|BP087903
genomic: GATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161795396|gb|FC078553.1|FC078553
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161814693|gb|FC102394.1|FC102394
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|7686923|gb|AW757571.1|AW757571
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|9441323|gb|BE441686.1|BE441686
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAACTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161801398|gb|FC088518.1|FC088518
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCTAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|15371560|gb|BI530986.1|BI530986
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161823322|gb|FC110116.1|FC110116
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: CAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161817186|gb|FC101594.1|FC101594
genomic: CAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGEST: gi|161823089|gb|FC107387.1|FC107387
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
EST: TGGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAG GCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
genomic: TTGAGGACGACAAGATCGAGCTGGCCAAGAAGCTGGAGGAGATGGCCAAGgtgcgtgtgt ... cgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAG
agcaactcttcctgacccaatactgctccttcctggttgttggtgcgcaccacagGCCAAGGGTGTGCAGCTGCTGCTGCCCACCGACGTGGTGGTGGCCGACAAGTTCGACGCCAACGCCAACACCCAGACCGTGCCCATCACCGCCATCCCCG
tcctgac putative branch site (score: 2)