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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGTACAAAGCGGTGCACCGCCTCACCGGCATCGCGTACGCAGTGAAAACCAACAAGGTGCCCATCACCACGCTACAAGCGCGCAACATGTGGCTGAACgtgagtcctgtcgcttgactggggactagttgttgagcgaggggcacacttctgctggcactgtggtcagccacgacgcctgcaacatacgtttcccgtcgccatgatgctctcag

Basic information

species Chlamydomonas reinhardtii
transcript EDO97272
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10793427|gb|AV630793.1|AV630793
EST:     CCAACAAGGTGCCCATCACCACGCTACAAGCGCGCAACATGTGGCTGAAC                         GAGATGCAAGCGCTGGCGGCAGTTCAGCCCCACCCCAACATCGTGGGCTTG
genomic: CCAACAAGGTGCCCATCACCACGCTACAAGCGCGCAACATGTGGCTGAACgtgagtcctg ... atgctctcagGAGATGCAAGCGCTGGCGGCAGTTCAGCCCCACCCCAACATCGTGGGCTTG
EST: gi|10793426|gb|AV630792.1|AV630792
EST:     CCAACAAGGTGCCCATCACCACGCTACAAGCGCGCAACATGTGGCTGAAC                         GAGATGCAAGCGCTGGCGGCAGTTCAGCCCCACCCCAACATCGT
genomic: CCAACAAGGTGCCCATCACCACGCTACAAGCGCGCAACATGTGGCTGAACgtgagtcctg ... atgctctcagGAGATGCAAGCGCTGGCGGCAGTTCAGCCCCACCCCAACATCGT