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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTAACGGAGAAGGGCCGCGGCTACCTGCCCGCCGAGACGGCGCAGGACAAGATGCACGGTGTGGTCAAGTTCGACCCCCGCACCGGCAAGCAGGTGCAGgtaggtcgcacaggaaactgggctcggtcgcgaggtctgaagatcattgggaagtcgctggatgcgggagcttagataagatatgatgtgacagggtgaacgggacttcatgtatggagcgcgtgtgctagccgctacccaggccgctaaccatggaacaccgcgaccctcgttttttgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDO97255
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161820638|gb|FC106138.1|FC106138
EST:     AGATGCACGGTGTGGTCAAGTTCGACCCCCGCACCGGCAAGCAGGTGCAG                         GCCAAGACGAAGGCCATGTCGTACACGAACTACTTCGCGGACGCGCTGACG
genomic: AGATGCACGGTGTGGTCAAGTTCGACCCCCGCACCGGCAAGCAGGTGCAGgtaggtcgca ... ttttttgcagGCCAAGACGAAGGCCATGTCGTACACGAACTACTTCGCGGACGCGCTGACG
EST: gi|7687465|gb|AW758111.1|AW758111
EST:     AGATGCACGGTGTGGTCAAGTTCGACCCCCGCACCGGCAAGCAGGTGCAG                         GCCAAGACGAAGGCCATGTCGTACACGAACTACTTCGCGGACGCGCTGACG
genomic: AGATGCACGGTGTGGTCAAGTTCGACCCCCGCACCGGCAAGCAGGTGCAGgtaggtcgca ... ttttttgcagGCCAAGACGAAGGCCATGTCGTACACGAACTACTTCGCGGACGCGCTGACG