1 5' 3' | 2 5' 3' |
gtgggattctttgattgatttgggtgtaaacaacacgtcatgtttctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTCGTCGTCTTACAGATATCGGTGACGTTTTAGATGCACGTTACGTTGTTT
species | Chlamydomonas reinhardtii |
transcript | EDO96278 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAG GTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTEST: gi|15692040|gb|BI716345.1|BI716345
genomic: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAGgtgggattct ... tctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
EST: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAG GTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTEST: gi|9210211|gb|BE337126.1|BE337126
genomic: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAGgtgggattct ... tctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
EST: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAG GTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTEST: gi|15697956|gb|BI722261.1|BI722261
genomic: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAGgtgggattct ... tctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
EST: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAG GTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTEST: gi|10778487|gb|AV635167.1|AV635167
genomic: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAGgtgggattct ... tctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
EST: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAG GTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTEST: gi|10793517|gb|AV630883.1|AV630883
genomic: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAGgtgggattct ... tctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
EST: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAG GTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTEST: gi|9264045|gb|BE352192.1|BE352192
genomic: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAGgtgggattct ... tctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
EST: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAG GTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTEST: gi|15372965|gb|BI532391.1|BI532391
genomic: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAGgtgggattct ... tctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
EST: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAG GTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
genomic: CAAGACAGGGCCTTCTTGATGAGAAAAGTTTTATCGCTAAAAGCAGTGAGgtgggattct ... tctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCT
gtgggattctttgattgatttgggtgtaaacaacacgtcatgtttctagtgcagGTGTACATATCTCAAGGATCTTTTGCGCGATGGTCGAATGAATCATGGGCTCGTCGTCTTACAGATATCGGTGACGTTTTAGATGCACGTTACGTTGTTT
gattgat putative branch site (score: 4)
tgtttct putative PPT
attgattt TA-rich tract