1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagttcttactttaaaaataagctaatagcttgtttgatattaagaattttggcatacttgaataaattaacaggacttttcgcttggtatatagagttgactaagtactttaagactcccattagggcttcccctgatatgaatgtatatttttagCAGGTACAACTTTGTGGTCCGGATAATTCTCCTTCTACTTGTTGCATGGGTGACTCTTCTTCTCTTCAATTCAGCATTGATAGTTGTGCCAGTTTCGCTG
species | Arabidopsis thaliana |
transcript | AT4G34100.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GTCAACACGGGTGAGGAATATGAAGATGATGACGAACAATCTGATTCTGA CAGGTACAACTTTGTGGTCCGGATAATTCTCCTTCTACTTGTTGCATGGGT
genomic: GTCAACACGGGTGAGGAATATGAAGATGATGACGAACAATCTGATTCTGAgtaagttctt ... atatttttagCAGGTACAACTTTGTGGTCCGGATAATTCTCCTTCTACTTGTTGCATGGGT
taagtactttaagactcccattagggcttcccctgatatgaatgtatatttttagCAGGTACAACTTTGTGGTCCGGATAATTCTCCTTCTACTTGTTGCATGGGTGACTCTTCTTCTCTTCAATTCAGCATTGATAGTTGTGCCAGTTTCGCTG
ccctgat putative branch site (score: 4)
tattttt putative PPT
tgatatgaatgtatat TA-rich tract