1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaatttattgaaaccttttatagttgtaccttcttttcgtatgtttgttggagtttggtataaccaattcctgttgtattctttatgtcagGTTGCTGTGAACACCACAATACAAAACGAAAGAGAATTCCTCGACCACATTATCAAATCTACAAACATGAAATGTCTCACTGCTCC
species | Arabidopsis thaliana |
transcript | AT4G31480.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CAGAGGTTGCTTTCAGAACTATGTGGGCAGAGTTCGAATGGGAAAACAAG GTTGCTGTGAACACCACAATACEST: gi|86058808|gb|DR354565.1|DR354565
genomic: CAGAGGTTGCTTTCAGAACTATGTGGGCAGAGTTCGAATGGGAAAACAAGgtaatttatt ... tttatgtcagGTTGCTGTGAACACCACAATAC
EST: CAGAGGTTGCTTTCAGAACTATGTGGGCAGAGTTCGAATGGGAAAACAAG GTTGCTGTGAACACCACAATACAAAACGAAAGAGAATTCCTCGACCACATTEST: gi|86086628|gb|DR382387.1|DR382387
genomic: CAGAGGTTGCTTTCAGAACTATGTGGGCAGAGTTCGAATGGGAAAACAAGgtaatttatt ... tttatgtcagGTTGCTGTGAACACCACAATACAAAACGAAAGAGAATTCCTCGACCACATT
EST: CAGAGGTTGCTTTCAGAACTATGTGGGCAGAGTTCGAATGGGAAAACAAG GTTGCTGTGAACACCACAATACAAAACGAAAGAGAATTCCTCGACCACATT
genomic: CAGAGGTTGCTTTCAGAACTATGTGGGCAGAGTTCGAATGGGAAAACAAGgtaatttatt ... tttatgtcagGTTGCTGTGAACACCACAATACAAAACGAAAGAGAATTCCTCGACCACATT
tcgtatgtttgttggagtttggtataaccaattcctgttgtattctttatgtcagGTTGCTGTGAACACCACAATACAAAACGAAAGAGAATTCCTCGACCACATTATCAAATCTACAAACATGAAATGTCTCACTGCTCC
gtataac putative branch site (score: 3)
tattcttt putative PPT
tattctttat TA-rich tract