1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gcaagatctctctttgctttactttcctgtaataatgtcttagtttccatttatagatttttaacaagatactacatcacttttccacttgccagGGAATATATCAAGTGGCTAAATGGAATGGGACTAAGGTTTCTGTAAAGATACTTGATAAGGATCTCTACAAGGATTCTGACACTAT
species | Arabidopsis thaliana |
transcript | AT2G31800.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTCGGAAAGCTGATGGTATCTCAAAG GGAATATATCAAGTGGCTAAATGGAATGGGACTAAGGTTTCTGTAAAGATAEST: gi|164037902|gb|ES155231.1|ES155231
genomic: TTCGGAAAGCTGATGGTATCTCAAAGgcaagatctc ... cacttgccagGGAATATATCAAGTGGCTAAATGGAATGGGACTAAGGTTTCTGTAAAGATA
EST: AGCTGATGGTATCTCAAAG GGAATATATCAAGTGGCTAAATGGAATGGGACTAAGGTATCTGTAAAGATA
genomic: AGCTGATGGTATCTCAAAGgcaagatctc ... cacttgccagGGAATATATCAAGTGGCTAAATGGAATGGGACTAAGGTTTCTGTAAAGATA
tagtttccatttatagatttttaacaagatactacatcacttttccacttgccagGGAATATATCAAGTGGCTAAATGGAATGGGACTAAGGTTTCTGTAAAGATACTTGATAAGGATCTCTACAAGGATTCTGACACTAT
ttttaac putative branch site (score: 2)
tcacttttccactt putative PPT
atttatagatttttaa TA-rich tract