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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTCTGGAATGGATCATGTTCGCGTGCACCCTAGATTTCTGCACTCAAACGCAACAAGTCACAAGTGGGCTCTAGGTGgtatgtatgaccccctcttcattttgccttaatcagagttctaacacaccactcagcaatctgttactgaattctgtcgtaaactagtcatattatttggctaacatatgctatgatattacag

Basic information

species Zea mays
transcript GRMZM2G161087_T02
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|78121690|gb|DV540074.1|DV540074
EST:     CCCTAGATTTCTGCACTCAAACGCAACAAGTCACAAGTGGGCTCTAGGTG                         CTTTGGCTGAGCTGCTGGACAATTCTCTTGACGAA
genomic: CCCTAGATTTCTGCACTCAAACGCAACAAGTCACAAGTGGGCTCTAGGTGgtatgtatga ... gatattacagCTTTGGCTGAGCTGCTGGACAATTCTCTTGACGAA
EST: gi|71772592|gb|DR970521.1|DR970521
EST:     CCCTAGATTTCTGCACTCAAACGCAACAAGTCACAAGTGGGCTCTAGGTG                         CTTTGGCTGAGCTGCTGGACAATTCTCTTGACGAA
genomic: CCCTAGATTTCTGCACTCAAACGCAACAAGTCACAAGTGGGCTCTAGGTGgtatgtatga ... gatattacagCTTTGGCTGAGCTGCTGGACAATTCTCTTGACGAA
EST: gi|211002749|gb|FL375709.1|FL375709
EST:     CCCTANATTTCTGCACTCAAACGCAACAAGTCACAAGTGGGCTCTAGGTG                         CTTTGGCTGAGCTGCTGGACAATTCTCTTGACGAA
genomic: CCCTAGATTTCTGCACTCAAACGCAACAAGTCACAAGTGGGCTCTAGGTGgtatgtatga ... gatattacagCTTTGGCTGAGCTGCTGGACAATTCTCTTGACGAA