1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GGGCCCTAACTATCTTATGTTACCCGTCAATGCTCCGAAGTGCGCTCATCACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtctgattatccctctttgtatgttctaatatgtctaatgttttaccttagattctagcggttgctagggtactcagaagtgctttgatatatgtatcagtattcatctaaatttcaaatactacagttgcacttcgaatgctgacgttgtgaatatgttcaaatgtatag
species | Physcomitrella patens |
transcript | PP1S422_8V6.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37853472|gb|BJ611480.1|BJ611480
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162180480|gb|FC356122.1|FC356122
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTGGTCATTCGGAACGAGTCEST: gi|162168186|gb|FC344916.1|FC344916
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37853543|gb|BJ611551.1|BJ611551
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|208353793|gb|DC906481.1|DC906481
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37846039|gb|BJ604047.1|BJ604047
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37850687|gb|BJ608695.1|BJ608695
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37836143|gb|BJ594151.1|BJ594151
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162197735|gb|FC374985.1|FC374985
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162154074|gb|FC330309.1|FC330309
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162161406|gb|FC337612.1|FC337612
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|208388749|gb|DC953483.1|DC953483
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162264608|gb|FC441203.1|FC441203
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162217909|gb|FC393905.1|FC393905
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: GAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162240134|gb|FC418261.1|FC418261
genomic: GAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162168202|gb|FC344932.1|FC344932
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162210932|gb|FC387030.1|FC387030
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37832780|gb|BJ590792.1|BJ590792
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162176217|gb|FC352674.1|FC352674
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162178514|gb|FC354966.1|FC354966
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162153219|gb|FC329001.1|FC329001
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162263557|gb|FC440093.1|FC440093
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162210236|gb|FC386422.1|FC386422
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162263558|gb|FC440094.1|FC440094
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37836958|gb|BJ594966.1|BJ594966
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162161405|gb|FC337611.1|FC337611
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162212921|gb|FC388929.1|FC388929
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162263890|gb|FC439185.1|FC439185
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|18336643|gb|BJ168666.1|BJ168666
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGGCGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37850171|gb|BJ608179.1|BJ608179
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|208383013|gb|DC927763.1|DC927763
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37850798|gb|BJ608806.1|BJ608806
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162223444|gb|FC399074.1|FC399074
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162232949|gb|FC407550.1|FC407550
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162211184|gb|FC386896.1|FC386896
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162210250|gb|FC386423.1|FC386423
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162185868|gb|FC360968.1|FC360968
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162173037|gb|FC349169.1|FC349169
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162174037|gb|FC350552.1|FC350552
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162170489|gb|FC347648.1|FC347648
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162158123|gb|FC333918.1|FC333918
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162200568|gb|FC376763.1|FC376763
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162179285|gb|FC356234.1|FC356234
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162267692|gb|FC443474.1|FC443474
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|208357025|gb|DC922305.1|DC922305
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162225009|gb|FC401425.1|FC401425
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|67693133|gb|BJ953366.1|BJ953366
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162185083|gb|FC362217.1|FC362217
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37839954|gb|BJ597962.1|BJ597962
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162178515|gb|FC354967.1|FC354967
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|100393831|gb|BY953524.1|BY953524
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGANTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162212155|gb|FC388265.1|FC388265
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|67697421|gb|BJ957654.1|BJ957654
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162206607|gb|FC382365.1|FC382365
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162154075|gb|FC330310.1|FC330310
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162206608|gb|FC382366.1|FC382366
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37844461|gb|BJ602469.1|BJ602469
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37825680|gb|BJ583746.1|BJ583746
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|67507796|gb|BJ940673.1|BJ940673
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|208396655|gb|DC920363.1|DC920363
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162153365|gb|FC329875.1|FC329875
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|19788686|gb|BQ040857.1|BQ040857
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|208382629|gb|DC919811.1|DC919811
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162277022|gb|FC453744.1|FC453744
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37849287|gb|BJ607295.1|BJ607295
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|67697189|gb|BJ957422.1|BJ957422
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162223443|gb|FC399073.1|FC399073
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162200016|gb|FC376478.1|FC376478
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162175798|gb|FC352100.1|FC352100
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|37836690|gb|BJ594698.1|BJ594698
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162162216|gb|FC337998.1|FC337998
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTCEST: gi|162225470|gb|FC401222.1|FC401222
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
EST: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAG GTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
genomic: ACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtct ... aaatgtatagGTGAACTACTTTCCTTCTCGATTTGATCCCGTTCGTCATTCGGAACGAGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGCCCTAACTATCTTATGTTACCCGTCAATGCTCCGAAGTGCGCTCATCACAACAATCACCATGAAGGATTCATGAACTTCATGCATCGTGACGAGGAGgtgaaagtctgattatccctctttgtatgttctaatatgtctaatgttttaccttagattctagcggttgctagggtactcagaagtgctttgatatatgtatcagtattcatctaaatttcaaatactacagttgcacttcgaatgctgacgttgtgaatatgttcaaatgtatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG