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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTATGCAAGGTGTACTCGATCAGTCTCAATAGgtttgacacttaacatttttttattccacatatatcttgattatacatttcatccggagttgattttgtttgcag

Basic information

species Glycine max
transcript GLYMA12G08860.1
intron # 22
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208301669|gb|GE096953.1|GE096953
EST:     TGTGTTATACGTATGCAAGGTGTACTCGATCAGTCTCAATAG                         TTCCACCTGTGTATTATGCACATTTGGCTGCCTTCAGGGCTCGCTGTTACA
genomic: TGTGTTATACGTATGCAAGGTGTACTCGATCAGTCTCAATAGgtttgacact ... ttgtttgcagTTCCACCTGTGTATTATGCACATTTGGCTGCCTTCAGGGCTCGCTGTTACA
EST: gi|208273175|gb|GE072757.1|GE072757
EST:     GTATGCAAGGTGTACTCGATCAGTCTCAATAG                         TTCCACCTGTGTATTATGCACATTTGGCTGCCTTCAGGGCTCGCTGTTACA
genomic: GTATGCAAGGTGTACTCGATCAGTCTCAATAGgtttgacact ... ttgtttgcagTTCCACCTGTGTATTATGCACATTTGGCTGCCTTCAGGGCTCGCTGTTACA
EST: gi|208106703|gb|GD906520.1|GD906520
EST:     AGGTGTACTCGATCAGTCTCAATAG                         TTCCACCTGTGTATTATGCACATTTGGCTGCCTTCAGGGCTCGCTGTTACA
genomic: AGGTGTACTCGATCAGTCTCAATAGgtttgacact ... ttgtttgcagTTCCACCTGTGTATTATGCACATTTGGCTGCCTTCAGGGCTCGCTGTTACA
EST: gi|208221868|gb|GE016890.1|GE016890
EST:     ACTCGATCAGTCTCAATAG                         TTCCACCTGTGTATTATGCACATTTGGCTGCCTTCAGGGCTCGCTGTTACA
genomic: ACTCGATCAGTCTCAATAGgtttgacact ... ttgtttgcagTTCCACCTGTGTATTATGCACATTTGGCTGCCTTCAGGGCTCGCTGTTACA
EST: gi|193412973|gb|FK381690.1|FK381690
EST:     GTATGCAAGGTGTACTCGATCAGTCTCAATAG                         TTCCACCTGTGTATTATGCACAT
genomic: GTATGCAAGGTGTACTCGATCAGTCTCAATAGgtttgacact ... ttgtttgcagTTCCACCTGTGTATTATGCACAT