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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGATAATGATTGGGAGTGTCCAAATTGCCATAACATCAACTTTGGCTTTCGCACAGTCTGTAATATGAGAAAGTGCAACACACCTAGACCTGCAAACCAGgtttgcaacttctgtctcatcttgctattataagcgatctgatattgcttcttttatgtatttaaattaagatcatttttaaaaattgtaattgtgttag...

Basic information

species Zea mays
transcript GRMZM5G868981_T05
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM5G868981_T01 (Zea mays), 5'ss of exon 5
lower sequence: LOC_Os08g41010.4 (Oryza sativa), 5'ss of exon 7
TGATAATGATTGGGAGTGTCCAAATTGCCATAACATCAACTTTGGCTTTCGCACAGTCTGTAATATGAGAAAGTGCAACACACCTAGACCTGCAAACCAGgtttgcaacttctgtctcatcttgctattataag---cgatctg--atattgcttcttttatgtatttaaattaagatcatttttaaaaattgtaattgtgttag
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TGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGgt--acaattctccacttcttgtacttgtgcaagttcccacctattgtattactactactaaat-tatgaaatatctttctttctataaatctaaaattggtc--