Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tcatacatatatattgttttcaagttttgcaaattgtttagttattcgtgcttgtagtaatttacttccagttttaaattattatttccatctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGTTCTTATTTCAGCAGAATCTGAAACTCAG

Basic information

species Zea mays
transcript GRMZM2G553379_T06
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71316728|gb|DR795038.1|DR795038
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|78089929|gb|DV518303.1|DV518303
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|18659149|gb|BM500180.1|BM500180
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|78081870|gb|DV510282.1|DV510282
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76913834|gb|DV165273.1|DV165273
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|101396806|gb|EB820329.1|EB820329
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACCAATATTCCACCGATTCATG                         TATGGACAAAATTC
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTC
EST: gi|148958634|gb|EC904889.2|EC904889
EST:     TACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: TACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|74232113|gb|DT640027.1|DT640027
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|50323594|gb|CO518720.1|CO518720
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|211020972|gb|FL097346.1|FL097346
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|149083437|gb|EE172757.2|EE172757
EST:     AAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTC-TGACCCGGTACGAGCGCTACTCCTATGCAGAAAAGG
genomic: AAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGA-CCGGTACGAGCGCTACTCCTATGCAGAAAAGG
EST: gi|67016868|gb|CO445617.1|CO445617
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76292652|gb|DV032220.1|DV032220
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76011626|gb|DT938796.1|DT938796
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|71316727|gb|DR795037.1|DR795037
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|50325933|gb|CO521059.1|CO521059
EST:     CTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: CTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|148958084|gb|EC904274.2|EC904274
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|71425444|gb|DR806674.1|DR806674
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|86468156|gb|DY234526.1|DY234526
EST:     ATCATCTTCTCCACCAAAGGAAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|33466538|gb|CF243587.1|CF243587
EST:     ACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|50324243|gb|CO519369.1|CO519369
EST:     ACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|91868416|gb|EB400027.1|EB400027
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|71306905|gb|DR789608.1|DR789608
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|91876123|gb|EB406080.1|EB406080
EST:     AGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: AGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|148980413|gb|EE027124.2|EE027124
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|89248658|gb|DY620444.1|DY620444
EST:     AGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: AGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|9742855|gb|BE519003.1|BE519003
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|50333588|gb|CO528714.1|CO528714
EST:     ACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|87156609|gb|DY401398.1|DY401398
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|87157251|gb|DY402040.1|DY402040
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|71325988|gb|DR799676.1|DR799676
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|78088355|gb|DV516748.1|DV516748
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|71306906|gb|DR789609.1|DR789609
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|211020973|gb|FL097347.1|FL097347
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATT
EST: gi|149001052|gb|EE038303.2|EE038303
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|101396804|gb|EB820328.1|EB820328
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76909292|gb|DV163313.1|DV163313
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76020109|gb|DT947279.1|DT947279
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|74238831|gb|DT646745.1|DT646745
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGC
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGC
EST: gi|71440936|gb|DR821986.1|DR821986
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAAATCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|211020971|gb|FL097345.1|FL097345
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76292653|gb|DV032221.1|DV032221
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|78082314|gb|DV510726.1|DV510726
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|71325989|gb|DR799677.1|DR799677
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|71440937|gb|DR821987.1|DR821987
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76011021|gb|DT938191.1|DT938191
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|22935963|gb|BU572238.1|BU572238
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|149079784|gb|EE168783.2|EE168783
EST:     CCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: CCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76932876|gb|DV173214.1|DV173214
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAANAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|149079785|gb|EE168784.2|EE168784
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAANAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|50325812|gb|CO520938.1|CO520938
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76927299|gb|DV171231.1|DV171231
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76927298|gb|DV171230.1|DV171230
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|74242354|gb|DT650268.1|DT650268
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|26559563|gb|CA831798.1|CA831798
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|50329667|gb|CO524793.1|CO524793
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGC
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGC
EST: gi|50325934|gb|CO521060.1|CO521060
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|26559940|gb|CA832175.1|CA832175
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|86470069|gb|DY236439.1|DY236439
EST:     ATCAT-TTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|78088356|gb|DV516749.1|DV516749
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76280608|gb|DV020176.1|DV020176
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|71425445|gb|DR806675.1|DR806675
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|74232112|gb|DT640026.1|DT640026
EST:     AGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: AGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|74242353|gb|DT650267.1|DT650267
EST:     ACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|149008923|gb|EE041143.2|EE041143
EST:     ATCATCTTCTCCCCCAAAGGGAAGCTCTACGAATATTCCACCGATTCATG                         GATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|76291867|gb|DV031435.1|DV031435
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|50324244|gb|CO519370.1|CO519370
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|149008922|gb|EE041142.2|EE041142
EST:     CAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: CAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|74238830|gb|DT646744.1|DT646744
EST:     AAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: AAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|89757241|gb|DY686923.1|DY686923
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|149083438|gb|EE172758.2|EE172758
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|37424942|gb|CF650205.1|CF650205
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
EST: gi|74244253|gb|DT652167.1|DT652167
EST:     ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATG                         TATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT
genomic: ATCATCTTCTCCACCAAAGGGAAGCTCTACGAGTATTCCACCGATTCATGgtacgtaccc ... tctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcgtgcttgtagtaatttacttccagttttaaattattatttccatctttcacagTATGGACAAAATTCTTGACCGGTACGAGCGCTACTCCTATGCAGAAAAGGTTCTTATTTCAGCAGAATCTGAAACTCAG
                                    ttatttccatctttc  CT-rich tract
            taatttacttccagtt  TA-rich tract