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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGCAGGCCTTCGTGGCGTACGTGAACGTCGGCTGCTACTACGTCGTCGGCGTGCCGCTCGGCGTCTTCCTCGGCTTCTACCTCGACCTCGGCGCCAAGgtaataataaacgcaagcaagcagaccagacgacagacgtccagagcagcagaccatgtgataactttaactgcgcgtctgcgtgcgtgcag

Basic information

species Zea mays
transcript GRMZM2G470075_T01
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211218506|gb|FL448111.1|FL448111
EST:     GCGTGCCGCTCGGCGTCTTCCTCGGCTTCTACCTCGACCTCGGCGCCAAG                         GGCATTTGGAGCGGCATGGTCATCGGGGGAACCATGATGCAGACGCTCATC
genomic: GCGTGCCGCTCGGCGTCTTCCTCGGCTTCTACCTCGACCTCGGCGCCAAGgtaataataa ... gtgcgtgcagGGCATTTGGAGCGGCATGGTCATCGGGGGAACCATGATGCAGACGCTCATC
EST: gi|76287403|gb|DV026971.1|DV026971
EST:     GCGTGCCGCTCGGCGTCTTCCTCGGCTTCTACCTCGACCTCGGCGCCAAG                         GGCATTTGGAGCGGCATGGTCATCGGGGGAACCATGATGCAGACGCTCATC
genomic: GCGTGCCGCTCGGCGTCTTCCTCGGCTTCTACCTCGACCTCGGCGCCAAGgtaataataa ... gtgcgtgcagGGCATTTGGAGCGGCATGGTCATCGGGGGAACCATGATGCAGACGCTCATC
EST: gi|71767622|gb|DR965559.1|DR965559
EST:     GCGTGCCGCTCGGCGTCTTCCTCGGCTTCTACCTCGACCTCGGCGCCAAG                         GGCATTTGGAGCGGCATGGTCATCGGGGGAACCATGATGCAGACGCTCATC
genomic: GCGTGCCGCTCGGCGTCTTCCTCGGCTTCTACCTCGACCTCGGCGCCAAGgtaataataa ... gtgcgtgcagGGCATTTGGAGCGGCATGGTCATCGGGGGAACCATGATGCAGACGCTCATC