1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TGGTGTAAGACCATTTGGAGTATCGCTGTTGATTGCTGGGTATGATGACAATGGCCCACAGTTGTATCAGgtatactgaagaagttacaagatagaaacctcaaacctgtttatcaacctttcaaaaaaaaggaaacctgtttattgtctcacagggatcatcacaagta...
species | Zea mays |
transcript | GRMZM2G382240_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTGATTGCTGGGTATGATGACAATGGCCCACAGTTGTATCAG GTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCATCAGCCATGGGAAAAEST: gi|166531900|gb|EG080480.1|EG080480
genomic: GTTGATTGCTGGGTATGATGACAATGGCCCACAGTTGTATCAGgtatactgaa ... atttcttcagGTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCATCAGCCATGGGAAAA
EST: TGACAATGGCCCACAGTTGTATCAG GTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCATCAGCCATGGGAAAAEST: gi|113576700|gb|DW751374.1|DW751374
genomic: TGACAATGGCCCACAGTTGTATCAGgtatactgaa ... atttcttcagGTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCATCAGCCATGGGAAAA
EST: TATCGCTGTTGATTGCTGGGTATGATGACAATGGCCCACAGTTGTATCAG GTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCA
genomic: TATCGCTGTTGATTGCTGGGTATGATGACAATGGCCCACAGTTGTATCAGgtatactgaa ... atttcttcagGTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGTAAGACCATTTGGAGTATCGCTGTTGATTGCTGGGTATGATGACAATGGCCCACAGTTGTATCAGgtatactgaagaagttacaagatagaaacctcaaacctgtttatcaacctttcaaaaaaaaggaaacctgtttattgtctcacagggatcatcacaagta
- - - - - - - - - - - - GCTGTT