1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGAATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATGgtaatatttcaattcgttatatctgtgcgtttctggatttgattagtctatcttgattgaatgctatctttatctctagaagtgcatctgaaattataaacttgttgttgcag
species | Zea mays |
transcript | GRMZM2G361847_T02 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATG GAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATAEST: gi|38687312|gb|CK144343.1|CK144343
genomic: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATGgtaatatttc ... gttgttgcagGAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATA
EST: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATG GAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATAEST: gi|67010792|gb|CO439541.1|CO439541
genomic: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATGgtaatatttc ... gttgttgcagGAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATA
EST: TATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATG GAGCGTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATAEST: gi|211145672|gb|FL260531.1|FL260531
genomic: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATGgtaatatttc ... gttgttgcagGAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATA
EST: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATG GAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATAEST: gi|211297091|gb|FL187053.1|FL187053
genomic: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATGgtaatatttc ... gttgttgcagGAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATA
EST: AAACCCATGCCATGAGTGGAAATG GAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATAEST: gi|211508656|gb|FL262678.1|FL262678
genomic: AAACCCATGCCATGAGTGGAAATGgtaatatttc ... gttgttgcagGAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATA
EST: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATG GAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATA
genomic: AATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATGgtaatatttc ... gttgttgcagGAGCTTTGACTTTTGACATAGAATATGCTAGATGGCTAGAGGACCAAAATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAATCTTCATTTCTAGCTCTGGAGACCAAACCCATGCCATGAGTGGAAATGgtaatatttcaattcgttatatctgtgcgtttctggatttgattagtctatcttgattgaatgctatctttatctctagaagtgcatctgaaattataaacttgttgttgcag
- - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - AGTGGA