1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCTCGTGTGGGTATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAGgtgattatcattaattcatcatattgttttttggaatgtagcacacgtgtaaaactggattttacctacctttttttgtccttcattaaaacataattac...
species | Zea mays |
transcript | GRMZM2G157010_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GTGTGGGTATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAG CTACAACATTTCGAAGCTGAAGATATCAAACAGGACTATGACACTGGAAAAEST: gi|83279433|gb|DV943441.1|DV943441
genomic: GTGTGGGTATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAGgtgattatca ... gttcaaacagCTACAACATTTCGAAGCTGAAGATATCAAACAGGACTATGACACTGGAAAA
EST: GTGTGGGTATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAG CTACAACATTTCGAAGCTGAAGATATCAAACAGGACTATGACACTGGAAAAEST: gi|166551183|gb|EG254777.1|EG254777
genomic: GTGTGGGTATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAGgtgattatca ... gttcaaacagCTACAACATTTCGAAGCTGAAGATATCAAACAGGACTATGACACTGGAAAA
EST: ATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAG CTACAACATTTCGAAGCTGAAGATATCAAACAGGACTATGACACTGGAAAAEST: gi|149077087|gb|EE165744.2|EE165744
genomic: ATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAGgtgattatca ... gttcaaacagCTACAACATTTCGAAGCTGAAGATATCAAACAGGACTATGACACTGGAAAA
EST: GTGTGGGTATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAG CTACAACATTTCGAAGCTGAAGATATCAAACAGGACTATGACACTGGAAAA
genomic: GTGTGGGTATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAGgtgattatca ... gttcaaacagCTACAACATTTCGAAGCTGAAGATATCAAACAGGACTATGACACTGGAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTCGTGTGGGTATGGAAGTACCATTTAATCTGTTGGGAACAGTCTATCATCAGgtgattatcattaattcatcatattgttttttggaatgtagcacacgtgtaaaactggattttacctacctttttttgtccttcattaaaacataattac
- - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaacata