1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtgagcgagacctaaccctagcccccgcccccttccctctgtctctaaccgcttccttctcatattcgtcttcaccctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCGTCGACGTCTTCATCCCGAGGGACCGCAG
species | Zea mays |
transcript | GRMZM2G110143_T05 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCC GAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGGCAAGGGTEST: gi|211362372|gb|FL342933.1|FL342933
genomic: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCCgtgagcgaga ... ctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGG-CAAGG-T
EST: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCC GAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCGEST: gi|211235451|gb|FL353173.1|FL353173
genomic: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCCgtgagcgaga ... ctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCG
EST: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCYTCC GAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCGEST: gi|211008119|gb|FL365557.1|FL365557
genomic: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCCgtgagcgaga ... ctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCG
EST: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCC GAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCGEST: gi|211161811|gb|FL316356.1|FL316356
genomic: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCCgtgagcgaga ... ctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCG
EST: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCC GAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCGEST: gi|149070638|gb|EE159049.2|EE159049
genomic: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCCgtgagcgaga ... ctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCG
EST: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCC GAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCGEST: gi|78105340|gb|DV523758.1|DV523758
genomic: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCCgtgagcgaga ... ctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCG
EST: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCC GAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCGEST: gi|149107883|gb|EE292243.2|EE292243
genomic: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCCgtgagcgaga ... ctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCG
EST: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCC GAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCG
genomic: GCCGGACATCCGCGACACCTTCTCGCTGCTCGTCCTCAACATCAGCTTCCgtgagcgaga ... ctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCG
cttccctctgtctctaaccgcttccttctcatattcgtcttcaccctctgctcagGAACCACGGCCGACGACCTTTTCCCGCTCTTCGAGCGCTGCGGCAAGGTCGTCGACGTCTTCATCCCGAGGGACCGCAG
ctctaac putative branch site (score: 9)
cttccttctcatattc putative PPT
tcatatt TA-rich tract