1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTGTCGCTGTGCGTGAAGAGGCTGGTCTACACCAACGATCAGGGGGAGGTCGTCAAAGGAGTCTGCTCGAACTTCCTCTgtcagttgtctagctttaatttccgccatgtctcagttcttccatgcagactaatatattatatactaagcatatatatacatactaatgcag
species | Zea mays |
transcript | GRMZM2G059083_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CACCAACGATCAGGGGGAGGTCGTCAAAGGAGTCTGCTCGAACTTCCTCT GTGACTTGAAGCCAGGCGCTGAGGTGAAGATCACAGGGCCAGTGGGCAAGGEST: gi|89253046|gb|DY624832.1|DY624832
genomic: CACCAACGATCAGGGGGAGGTCGTCAAAGGAGTCTGCTCGAACTTCCTCTgtcagttgtc ... actaatgcagGTGACTTGAAGCCAGGCGCTGAGGTGAAGATCACAGGGCCAGTGGGCAAGG
EST: CACCAACGATCAGGGGGAGGTCGTCAAAGGAGTCTGCTCGAAATTCCTCT GTGACTTGAAGCCAGGCGCTGAAGTGAAGATCACAGGGCCAGTGGGCAAGGEST: gi|4572774|gb|AI586423.1|AI586423
genomic: CACCAACGATCAGGGGGAGGTCGTCAAAGGAGTCTGCTCGAACTTCCTCTgtcagttgtc ... actaatgcagGTGACTTGAAGCCAGGCGCTGAGGTGAAGATCACAGGGCCAGTGGGCAAGG
EST: CACCAACGATCAGGGGGAGGTCGTCAAAGGAGTCTGCTCGAACTTCCTCT GTGACTTGAAGCCAGGCGCTGAGGTGAAGATCACAGGGCCAGTGGGCAAGG
genomic: CACCAACGATCAGGGGGAGGTCGTCAAAGGAGTCTGCTCGAACTTCCTCTgtcagttgtc ... actaatgcagGTGACTTGAAGCCAGGCGCTGAGGTGAAGATCACAGGGCCAGTGGGCAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTCGCTGTGCGTGAAGAGGCTGGTCTACACCAACGATCAGGGGGAGGTCGTCAAAGGAGTCTGCTCGAACTTCCTCTgtcagttgtctagctttaatttccgccatgtctcagttcttccatgcagactaatatattatatactaagcatatatatacatactaatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG