1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AAATCGGTGGTGGCCGAGCTGGCGGCGTCGTTCAGCGATGTCCGTGTCACGCCGCGCCAGAACCCCAAGACCAAGAGCTTCCTACCGTCGCCCTCCTTCTgtaagctccctgccgcctgttcgcttatgttgggtaactagctagtctgactgtgtattggttatagctgcttagaatgattgatttcgtgtgttggtgt...
species | Zea mays |
transcript | GRMZM2G056849_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCCGCGCCAGAACCCCAAGACCAAGAGCTTCCTACCGTCGCCCTCCTTCT ATTCTTCCTCGAAGAAAGGTAAACCTCAGAAATTGGTCAGCTTGTGCCTTGEST: gi|211305796|gb|FK975909.1|FK975909
genomic: GCCGCGCCAGAACCCCAAGACCAAGAGCTTCCTACCGTCGCCCTCCTTCTgtaagctccc ... tgtacttcagATTCTTCCTCGAAGAAAGGTAAACCTCAGAAATTGGTCAGCTTGTGCCTTG
EST: GCCGCGCCAGAACCCCAAGACCAAGAGCTTCCTACCGTCGCCCTCCTTCT ATTCTTCCTCGAAGAAAGGTAAACCTCAGAAATTGGTCAGCTTGTGCCTTG
genomic: GCCGCGCCAGAACCCCAAGACCAAGAGCTTCCTACCGTCGCCCTCCTTCTgtaagctccc ... tgtacttcagATTCTTCCTCGAAGAAAGGTAAACCTCAGAAATTGGTCAGCTTGTGCCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAATCGGTGGTGGCCGAGCTGGCGGCGTCGTTCAGCGATGTCCGTGTCACGCCGCGCCAGAACCCCAAGACCAAGAGCTTCCTACCGTCGCCCTCCTTCTgtaagctccctgccgcctgttcgcttatgttgggtaactagctagtctgactgtgtattggttatagctgcttagaatgattgatttcgtgtgttggtgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccctgcc