1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagttccatttgattgggagaagtgctgctttcttaaatattatgtgctgccttgagctaacttcctacatttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGACAGGATATCCTCCACATGCCATT
species | Zea mays |
transcript | GRMZM2G040349_T01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGEST: gi|89762792|gb|DY690244.1|DY690244
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGEST: gi|211340500|gb|FL126029.1|FL126029
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTGT-TGATGCTTATTATAGTGGGGGTTGGGGTCTEST: gi|211338112|gb|FL126025.1|FL126025
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACT-TCTGATGCTTATTATAGTGCGG-TTGGGGTCT
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGGCGGTTGGGGTCTTEST: gi|76012499|gb|DT939669.1|DT939669
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTG-CGGTTGGGGTCTT
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGEST: gi|50333900|gb|CO529026.1|CO529026
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGEST: gi|30088407|gb|CB886612.1|CB886612
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGEST: gi|76015258|gb|DT942428.1|DT942428
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGEST: gi|78108019|gb|DV526437.1|DV526437
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGEST: gi|31359967|gb|CD444324.1|CD444324
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTGT-TGATGCTTATTATAGTGGGGTTGGGGTCTTEST: gi|211340497|gb|FL126026.1|FL126026
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACT-TCTGATGCTTATTATAGTGCGGTTGGGGTCTT
EST: AGGAAGGCTCTGC-TTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTEST: gi|91057234|gb|EB167652.1|EB167652
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACT
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGEST: gi|74233446|gb|DT641360.1|DT641360
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
EST: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTT GCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
genomic: AGGAAGGCTCTGCCTTTTTGGCCCCAAAATTACATTACAGCCCATCTTTTgtaagttcca ... tttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTG
ctgctttcttaaatattatgtgctgccttgagctaacttcctacatttgttccagGCTTGTATTCCTTATACTTCTGATGCTTATTATAGTGCGGTTGGGGTCTTGACAGGATATCCTCCACATGCCATT
agctaac putative branch site (score: 2)
tttgttcc putative PPT
ttcttaaatattatgt TA-rich tract