1 5' 3' | 2 5' 3' | 3 5' 3' |
GGAGAAGAGGTGGAGGTGAGAACGGAGCAGATGCAGTTCGAGCAACTCCCTGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAGgtgagtacagatttctctgccaaccagattccttctatgcttgagattttgaatggctatctcagcactgccaattttgcaagtttgtattgattttagg...
species | Zea mays |
transcript | GRMZM2G036418_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAG AAATGGCTCTCAAACTTGACAGTTTGGTGGGTGATATAGAAGATGCAGTTTEST: gi|76288801|gb|DV028369.1|DV028369
genomic: TGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAGgtgagtacag ... tcctatacagAAATGGCTCTCAAACTTGACAGTTTGGTGGGTGATATAGAAGATGCAGTTT
EST: TGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAGGTTGTCCTATACAGEST: gi|211307425|gb|FK957695.1|FK957695
genomic: TGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAG--T--A---TG-------CAGgtgagtacag .
EST: TGCTCTGGCCTCCGANGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAG AAATGGCTCTCEST: gi|71768328|gb|DR966265.1|DR966265
genomic: TGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAGgtgagtacag ... tcctatacagAAATGGCTCTC
EST: TGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAG AAATGGCTCTCAAACTTGACAGTTTGGTGGGTGATATAGAAGATGCAGTTT
genomic: TGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAGgtgagtacag ... tcctatacagAAATGGCTCTCAAACTTGACAGTTTGGTGGGTGATATAGAAGATGCAGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGAAGAGGTGGAGGTGAGAACGGAGCAGATGCAGTTCGAGCAACTCCCTGCTCTGGCCTCCGAGGTGGCGAGAGTAGAGATGGTCAGAGAGTATGCAGgtgagtacagatttctctgccaaccagattccttctatgcttgagattttgaatggctatctcagcactgccaattttgcaagtttgtattgattttagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG