1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATGGGGAGGCACTTTAATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatcaatgccttccttttggcacacatgttaggcaacatgatttgtatctgaagttgttttttaatctttcatttggaaagacaatcgtagtca...
species | Zea mays |
transcript | GRMZM2G012284_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGCEST: gi|67039856|gb|CO466111.1|CO466111
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGCEST: gi|76288406|gb|DV027974.1|DV027974
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGCEST: gi|38568991|gb|CF974876.1|CF974876
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCEST: gi|91872772|gb|EB402729.1|EB402729
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCC
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGCEST: gi|67024981|gb|CO453730.1|CO453730
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGCEST: gi|71763789|gb|DR961726.1|DR961726
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGCEST: gi|71449543|gb|DR830593.1|DR830593
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGCEST: gi|33942467|gb|CF349067.1|CF349067
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
EST: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAG TGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
genomic: ATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatc ... ctatgtgcagTGTGATTCAGTTCTGTGCCACGGCTTTTGCCTACTACGCACAAGCAACTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGGGAGGCACTTTAATGAACTCCTTCCTGTTTAATGTTGGGCTCATACTACTTTGCTCCATCAGgtatgccatcaatgccttccttttggcacacatgttaggcaacatgatttgtatctgaagttgttttttaatctttcatttggaaagacaatcgtagtca
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