1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CTGAGTTTTCTGGTCTTTGATCAGCTGTGTGTAAGGGACTAAAATTTGGAAAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAGgttgacaaaaaaatatttcacagtttcaatctttgatcaattgttctacagtctcaattgtacctttcttgcacttacgatgttaccataatttgtcatt...
species | Zea mays |
transcript | GRMZM2G005869_T03 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACGEST: gi|38229656|gb|CF919969.1|CF919969
genomic: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAGgttgacaaaa ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
EST: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACGEST: gi|34391283|gb|CF384511.1|CF384511
genomic: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAGgttgacaaaa ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
EST: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACGEST: gi|211148002|gb|FL097065.1|FL097065
genomic: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAGgttgacaaaa ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
EST: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACGEST: gi|71774990|gb|DR972868.1|DR972868
genomic: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAGgttgacaaaa ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
EST: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAG CCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
genomic: AAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAGgttgacaaaa ... ctgcctgcagCCCATATAAAAGTTGATCTCATGAATTCGGGAAGAACAGCGGCATCCAACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGAGTTTTCTGGTCTTTGATCAGCTGTGTGTAAGGGACTAAAATTTGGAAAGTGTCATCCTTCGAAGTTGACAACCAACCAATGTAGCATGTTTGACAGgttgacaaaaaaatatttcacagtttcaatctttgatcaattgttctacagtctcaattgtacctttcttgcacttacgatgttaccataatttgtcatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaat