1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCCTCACGCTGCTCTACTCCCACGGCAACGCCGCCGACCTGGGACAGATGTACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatatatgtaatgtaacgtgcgctctctagctctcgccgtgttttgctgcttcgactagactgggttgagatcctatctgttattacgctgcgat...
species | Zea mays |
transcript | GRMZM2G003718_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGG TTATGACTATTCTGGGTACGGGCAATCATCTGGGAAGEST: gi|71440952|gb|DR822002.1|DR822002
genomic: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatat ... ttttctacagTTATGACTATTCTGGGTACGGGCAATCATCTGGGAAG
EST: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGG TTATGACTATTCTGGGGACGGGCAATCATCTGGGAAGEST: gi|148938391|gb|EC882706.2|EC882706
genomic: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatat ... ttttctacagTTATGACTATTCTGGGTACGGGCAATCATCTGGGAAG
EST: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGG TTATGACTATTCTGGGTACGGGCAATCATCTGGGAAGEST: gi|50333770|gb|CO528896.1|CO528896
genomic: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatat ... ttttctacagTTATGACTATTCTGGGTACGGGCAATCATCTGGGAAG
EST: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGG TTATGACTATTCTGGGTACGGGCAATCATCTGGGAAGEST: gi|71434067|gb|DR815117.1|DR815117
genomic: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatat ... ttttctacagTTATGACTATTCTGGGTACGGGCAATCATCTGGGAAG
EST: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGG TTATGACTATTCTGGGTACGGGCAATCATCTGGGAAGEST: gi|50324710|gb|CO519836.1|CO519836
genomic: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatat ... ttttctacagTTATGACTATTCTGGGTACGGGCAATCATCTGGGAAG
EST: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGG TTATGACTATTCTGGGTACGGGCAATCATCTGGGAAGEST: gi|78089451|gb|DV517825.1|DV517825
genomic: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatat ... ttttctacagTTATGACTATTCTGGGTACGGGCAATCATCTGGGAAG
EST: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGG TTATGACTATTCTGGGTACGGGCAATCATCTGGGAAG
genomic: TACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatat ... ttttctacagTTATGACTATTCTGGGTACGGGCAATCATCTGGGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCTCACGCTGCTCTACTCCCACGGCAACGCCGCCGACCTGGGACAGATGTACGAGCTCTTCGTCGAGCTCAGCGCCCACCTCAATGTCAACCTCATGGGgtatgtatatatgtaatgtaacgtgcgctctctagctctcgccgtgttttgctgcttcgactagactgggttgagatcctatctgttattacgctgcgat
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