Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|14203935|gb|BG837612.1|BG837612EST: TCACTCCCCGACCTGGGGCACTCATGGTCAACATGGGCAGCTTTCTTCAG CTTGTGACGAATGACCGGTACAAGAGCGTGGATCACCGGGTGCCGGCTAAC
genomic: TCACTCCCCGACCTGGGGCACTCATGGTCAACATGGGCAGCTTTCTTCAGgcatgcatgg ... atgcatgcagCTTGTGACGAATGACCGGTACAAGAGCGTGGATCACCGGGTGCCGGCTAAC
EST:
gi|14203965|gb|BG837642.1|BG837642EST: TCACTCCCCGACCTGGGGCACTCATGGTCAACATGGGCAGCTTTCTTCAG CTTGTGACGAATGACCGGTACAAGAGCGTGGATCACCGGGTGCCG-CTAAC
genomic: TCACTCCCCGACCTGGGGCACTCATGGTCAACATGGGCAGCTTTCTTCAGgcatgcatgg ... atgcatgcagCTTGTGACGAATGACCGGTACAAGAGCGTGGATCACCGGGTGCCGGCTAAC
EST:
gi|14204210|gb|BG837887.1|BG837887EST: TCACTCCCCGACCTGGGGCACTCATGGTCAACATGGGCAGCTTTCTTCAG CTTGTGACGAATGACCGGTACAAGAGCGTGGATCACCGGGTGCCGGCTAAC
genomic: TCACTCCCCGACCTGGGGCACTCATGGTCAACATGGGCAGCTTTCTTCAGgcatgcatgg ... atgcatgcagCTTGTGACGAATGACCGGTACAAGAGCGTGGATCACCGGGTGCCGGCTAAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCTGCAGGTGCTAGTCGATCGCGGAGGCGGCCGCCAGACGTGGGTGGACGTCACTCCCCGACCTGGGGCACTCATGGTCAACATGGGCAGCTTTCTTCAGgcatgcatggatgtgatgtgacgaattaatgacgacctagctcatcgactacacttgtttttgatttcaattcgcctcttaattaatacatacaaagcactgagatcatgcatgatgcatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT