1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GGTTCAATGCAAGTTCTTTGCACATGGAGCATGTCTTAAAGGGGACCATTGTGAGTTTTCACATGATTGGAAGGCCTCACCAAATAATgtaaaattttctgactttcttagaattgacccataaatctagaggctccattatatccttgtttcctcatctttgtgttacag
species | Vitis vinifera |
transcript | Vv13s0064g01090.t01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAGGGGACCATTGTGAGTTTTCACATGATTGGAAGGCCTCACCAAATAAT ATTTGTCACCTTTTATCAAAAAGGTGTCTGCTCATATGGTGGTCGATGCAGEST: gi|110733086|gb|EE108941.1|EE108941
genomic: AAGGGGACCATTGTGAGTTTTCACATGATTGGAAGGCCTCACCAAATAATgtaaaatttt ... tgtgttacagATTTGT-ACCTTTTATCAAAAAGGTGTCTGCTCATATGGTGGTCGATGCAG
EST: AAGGGGACCATTGTGAGTTTTCACATGATTGGAAGGCCTCACCAAATAAT ATTTGTACCTTTTATCAAAAAGGTGTCTGCTCATATGGTGGTCGATGCAGA
genomic: AAGGGGACCATTGTGAGTTTTCACATGATTGGAAGGCCTCACCAAATAATgtaaaatttt ... tgtgttacagATTTGTACCTTTTATCAAAAAGGTGTCTGCTCATATGGTGGTCGATGCAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTCAATGCAAGTTCTTTGCACATGGAGCATGTCTTAAAGGGGACCATTGTGAGTTTTCACATGATTGGAAGGCCTCACCAAATAATgtaaaattttctgactttcttagaattgacccataaatctagaggctccattatatccttgtttcctcatctttgtgttacag
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