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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGACATAGatctggccatgcagcaatgcatggcgatcggctatggattcctgacgaaattctcgcctgtctcccc

Basic information

species Selaginella moellendorffii
transcript EFJ29991
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169048543|gb|FE454425.1|FE454425
EST:     CC-CCTAAAGATCGCCGAC---G
genomic: CCTCC-AAAGATCGCCGACATAG
EST: gi|169069942|gb|FE480376.1|FE480376
EST:     TCCTCCAAAGATCGCTG--AT-G
genomic: TCCTCCAAAGATCGCCGACATAG
EST: gi|169068681|gb|FE477984.1|FE477984
EST:     CC-CCTAAAGATCGCCGAC---G
genomic: CCTCC-AAAGATCGCCGACATAG
EST: gi|169042955|gb|FE452309.1|FE452309
EST:     CC-CCTAAAGATCGCCGAC---G
genomic: CCTCC-AAAGATCGCCGACATAG
EST: gi|169065002|gb|FE475074.1|FE475074
EST:     CC-CCTAAAGATCGCCGAC---G
genomic: CCTCC-AAAGATCGCCGACATAG
EST: gi|169098946|gb|FE501719.1|FE501719
EST:     CC-CCTAAAGATCGCCGAC---G
genomic: CCTCC-AAAGATCGCCGACATAG