1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaagctccacattgatagctaatgctctcgctaacatggaagacgttctttgtttctcaagATCACCAGACACGCTCTTCTACTCCACGCCCAGATTCGTCACTCACATTGACGACGCTGCGATCCAGGCGCTCACTAAATACTACGCAACAGTGTTCCCA
species | Selaginella moellendorffii |
transcript | EFJ23996 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGGCCGGAGGAATTCCCCTTCAAGAAGGAAGATTTCCAGCGTTATGACGA ATCACCAGACACGCTCTTCTACTCCACGCCCAGATTCGTCACTCACATTGAEST: gi|70669162|gb|DN837739.1|DN837739
genomic: TGGCCGGAGGAATTCCCCTTCAAGAAGGAAGATTTCCAGCGTTATGACGAgtaagctcca ... gtttctcaagATCACCAGACACGCTCTTCTACTCCACGCCCAGATTCGTCACTCACATTGA
EST: TGGCCGGAGGAATTCCCCTTCAAGAAGGAAGATTTCCAGCGTTATGACGA ATCACCAGACACGCTCTTCTACTCCACGCCCAGATTCGTCACTCACATTGAEST: gi|169069452|gb|FE480549.1|FE480549
genomic: TGGCCGGAGGAATTCCCCTTCAAGAAGGAAGATTTCCAGCGTTATGACGAgtaagctcca ... gtttctcaagATCACCAGACACGCTCTTCTACTCCACGCCCAGATTCGTCACTCACATTGA
EST: TGGCCGGAGGAATTCCCCTTCAAGAAGGAAGATTTCCAGCGTTATGACGA ATCACCAGACACGCTCTTCTACTCCACGCCCAGATTCGTCACTCACATTGA
genomic: TGGCCGGAGGAATTCCCCTTCAAGAAGGAAGATTTCCAGCGTTATGACGAgtaagctcca ... gtttctcaagATCACCAGACACGCTCTTCTACTCCACGCCCAGATTCGTCACTCACATTGA
ccacattgatagctaatgctctcgctaacatggaagacgttctttgtttctcaagATCACCAGACACGCTCTTCTACTCCACGCCCAGATTCGTCACTCACATTGACGACGCTGCGATCCAGGCGCTCACTAAATACTACGCAACAGTGTTCCCA
cgctaac putative branch site (score: 14)
cgttctttgtttctc putative PPT
tttgttt TA-rich tract