1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgaatgttcttcgcttttgttcttggaattattttttggtgggtgtttaccagtagaagatgactgactgggaagtggcagTTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGTGGATTCGTTCGTATATCTTCGAACATTTGTTGCGTTGTCGTCGAGTACC
species | Selaginella moellendorffii |
transcript | EFJ19310 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AACAAGAAGTGGCTGTCTGGCAAAAGTTGGATCATCCCAATGTGACCAAG TTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGTEST: gi|169061100|gb|FE470106.1|FE470106
genomic: AACAAGAAGTGGCTGTCTGGCAAAAGTTGGATCATCCCAATGTGACCAAGgtgaatgttc ... gaagtggcagTTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGT
EST: AACAAGAAGTGGCTGTCTGGCAAAAGTTGGATCATCCCAATGTGACCAAG TTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGTEST: gi|169093217|gb|FE494211.1|FE494211
genomic: AACAAGAAGTGGCTGTCTGGCAAAAGTTGGATCATCCCAATGTGACCAAGgtgaatgttc ... gaagtggcagTTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGT
EST: AACAAGAAGTGGCTGTCTGGCAAAAGCTGGATCATCCCAATGTGACCAAG TTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGTEST: gi|169041047|gb|FE447656.1|FE447656
genomic: AACAAGAAGTGGCTGTCTGGCAAAAGTTGGATCATCCCAATGTGACCAAGgtgaatgttc ... gaagtggcagTTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGT
EST: AACAAGAAGTGGCTGTCTGGCAAAAGTTGGATCATCCCAATGTGACCAAG TTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGT
genomic: AACAAGAAGTGGCTGTCTGGCAAAAGTTGGATCATCCCAATGTGACCAAGgtgaatgttc ... gaagtggcagTTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGT
aattattttttggtgggtgtttaccagtagaagatgactgactgggaagtggcagTTTGTTGGAGCTTGCGTCGGATCGCCGGATCTCCAAGTCGCGTCCACCGGTGGATTCGTTCGTATATCTTCGAACATTTGTTGCGTTGTCGTCGAGTACC
gactgac putative branch site (score: 12)
tttttt TA-rich tract