1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTGGTTTCTTACGTGGAATGGTTCATGGACAAGTTCCCGGACGGCGACCCCGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatcgaatcaagcagcgtgttttccaatagttttgatgtgagttctatactgccag
species | Selaginella moellendorffii |
transcript | EFJ13137 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCG GTATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGTEST: gi|169021499|gb|FE428573.1|FE428573
genomic: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatc ... atactgccagGCATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGT
EST: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCG GCATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGTEST: gi|169057606|gb|FE463657.1|FE463657
genomic: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatc ... atactgccagGCATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGT
EST: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCG GCATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGTEST: gi|169051534|gb|FE459769.1|FE459769
genomic: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatc ... atactgccagGCATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGT
EST: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCG GCATGGAGTTCEST: gi|169025176|gb|FE434113.1|FE434113
genomic: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatc ... atactgccagGCATGGAGTTC
EST: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCG GTATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGTEST: gi|169059192|gb|FE467194.1|FE467194
genomic: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatc ... atactgccagGCATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGT
EST: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCG GTATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGTEST: gi|169057763|gb|FE465257.1|FE465257
genomic: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatc ... atactgccagGCATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGT
EST: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCG GTATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGT
genomic: CGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatc ... atactgccagGCATGGAGTTCCACGATTTGCTAGACATCCCTCAGGGCGATCGAAGGAAGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGTTTCTTACGTGGAATGGTTCATGGACAAGTTCCCGGACGGCGACCCCGCCCAGTATTTGATCGAGGAGGTTCTCTTCCGCGCAGCCAGAAAGGCCGgtaagtgatcgaatcaagcagcgtgttttccaatagttttgatgtgagttctatactgccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG