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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGCTGCCACGGTGGGACGTGTGGCTGACAAGGCAGACATTGTAATTCCAGTTGGAACAGgtaattgtttctcatattgtgtaatttcttcgtctcaattttgttttag

Basic information

species Selaginella moellendorffii
transcript EFJ13131
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169048422|gb|FE456331.1|FE456331
EST:     GGGACGTGTGGCTGACAAGGCAGACATTGTAATTCCAGTTGGAACAG                         TTTCTGGATTACATGCCCGGCTTGAGAAGAGAGATTCGATGCTTATGGTAA
genomic: GGGACGTGTGGCTGACAAGGCAGACATTGTAATTCCAGTTGGAACAGgtaattgttt ... tttgttttagTTTCTGGATTACATGCCCGGCTTGAGAAGAGAGATTCGATGCTTATGGTAA
EST: gi|169059706|gb|FE467783.1|FE467783
EST:     GGGACGTGTGGCTGACAAGGCAGACATTGTAATTCCAGTTGGAACAG                         TTTCTGGATTACATGCCCGGCTTGAGAAGAGAGATTCGATGCTTATGGTAA
genomic: GGGACGTGTGGCTGACAAGGCAGACATTGTAATTCCAGTTGGAACAGgtaattgttt ... tttgttttagTTTCTGGATTACATGCCCGGCTTGAGAAGAGAGATTCGATGCTTATGGTAA
EST: gi|169103220|gb|FE505624.1|FE505624
EST:     GGTGGGACGTGTGGCTGACAAGGCAGACATTGTAATTCCAGTTGGAACAG                         TTTCTGGATTACATGCCCGGCTTGAGAAGAGAGATTCGATGCTTATGGTAA
genomic: GGTGGGACGTGTGGCTGACAAGGCAGACATTGTAATTCCAGTTGGAACAGgtaattgttt ... tttgttttagTTTCTGGATTACATGCCCGGCTTGAGAAGAGAGATTCGATGCTTATGGTAA