1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CAACAGTGTGGGGCGATCCGAAAGACGTTGGAGCAGCCGTGGGTGGCAAATCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatcatctttctcgtcttagaggatgaagttggctggtttttttgcag
species | Selaginella moellendorffii |
transcript | EFJ07654 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AACAATGGAAAAGATTTGGATGCTGTGAA GCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCATEST: gi|169069904|gb|FE477556.1|FE477556
genomic: AACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatc ... ttttttgcagGCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
EST: TCGTTCCATGCCGTTTTGGACAACAATGGAAAAGATTTGGATGCTGTGAA GCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCATEST: gi|169034179|gb|FE444291.1|FE444291
genomic: TCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatc ... ttttttgcagGCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
EST: TCGTTCCATGCCGTTTTGGACAACAATGGAAAAGATTTGGATGCTGTGAA GCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCATEST: gi|169109762|gb|FE511833.1|FE511833
genomic: TCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatc ... ttttttgcagGCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
EST: AAAGATTTTGATGCTGTGAA GCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCATEST: gi|169064480|gb|FE472563.1|FE472563
genomic: AAAGATTTGGATGCTGTGAAgtatgtgatc ... ttttttgcagGCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
EST: TCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAA GCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCATEST: gi|169053973|gb|FE461272.1|FE461272
genomic: TCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatc ... ttttttgcagGCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
EST: TCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAA GCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCATEST: gi|169103551|gb|FE507398.1|FE507398
genomic: TCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatc ... ttttttgcagGCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
EST: GACAACAATGGAAAAGATTTGGATGCTGTGAA GCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCATEST: gi|169049507|gb|FE457703.1|FE457703
genomic: GACAACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatc ... ttttttgcagGCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
EST: TCGTTCCATGCCGTTTTGGACAACAATGGAAAAGATTTGGATGCTGTGAA GCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
genomic: TCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatc ... ttttttgcagGCCTGTTGTGGACTGGGCGAAATCCCAAGGTGTGGAGCAATTCTTGTTCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAACAGTGTGGGGCGATCCGAAAGACGTTGGAGCAGCCGTGGGTGGCAAATCGTTCCATGCCGTTCTAGACAACAATGGAAAAGATTTGGATGCTGTGAAgtatgtgatcatctttctcgtcttagaggatgaagttggctggtttttttgcag
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