1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaaggagtcagccgcattttccaaaaccaactccctcgtttgaggctcttgtgaactacagtaagagatgcccagatgttcaagttgtgcgaaggtttttaataattatatttttttactgatttggatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGACGGATGGGCAGTCTTCCGTGACGGTGCGGACGTGCTCCGCGAAATAGAA
species | Physcomitrella patens |
transcript | PP1S99_226V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: ATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|37849674|gb|BJ607682.1|BJ607682
genomic: ATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: CACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCCTGEST: gi|162159292|gb|FC334612.1|FC334612
genomic: CACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGT-CCTG
EST: ACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|162179970|gb|FC356041.1|FC356041
genomic: ACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGAEST: gi|37849726|gb|BJ607734.1|BJ607734
genomic: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGA
EST: TCTTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|37829096|gb|BJ587108.1|BJ587108
genomic: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|162166161|gb|FC342598.1|FC342598
genomic: TCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|162168423|gb|FC344100.1|FC344100
genomic: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|67720233|gb|BJ970492.1|BJ970492
genomic: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACAGCATTTTACGTCCTGAEST: gi|37851392|gb|BJ609400.1|BJ609400
genomic: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: GATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|37826387|gb|BJ584399.1|BJ584399
genomic: GATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|37841888|gb|BJ599896.1|BJ599896
genomic: TCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TCNTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|18334187|gb|BJ166203.1|BJ166203
genomic: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TCNTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGTATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|37831474|gb|BJ589486.1|BJ589486
genomic: TCCTACGATCTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|18337693|gb|BJ169717.1|BJ169717
genomic: TACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: CTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGAEST: gi|162176973|gb|FC353650.1|FC353650
genomic: CTCATGCACGCCGACCACTTGTTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
EST: TTCAGTACACTCACTACCAA GTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
genomic: TTCAGTACACTCACTACCAAgtaaggagtc ... gatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGA
aagttgtgcgaaggtttttaataattatatttttttactgatttggatgcaacagGTGCAGCATTGTTAACGTGGTGATGGAGATGGACCGCATTTTACGTCCTGACGGATGGGCAGTCTTCCGTGACGGTGCGGACGTGCTCCGCGAAATAGAA
tactgat putative branch site (score: 2)
aaggtttttaataatt TA-rich tract