1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ctatctttttttcttttctgacaggtgttggtaggtttattgtcgaaaaacttatgtacaaccgggttggtttctctgacactcgccaattggtgaacagGTTCCACTTGGGGGTGGCTATCGATTGATCGATGTGCCCATGAGCAACTGCATTAACAGCGGGATTAACAAGATTTATGTTCTCACTCAGTTCAATTCTA
species | Physcomitrella patens |
transcript | PP1S98_52V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGGCAGGCACTCGACTCCAACCCCTCACTCTTCGCCGAGCAAAGCCAGCG GTTCCACTTGGGGGTGGCTATCGATTGATCGATGTGCCCATGAGCAACTGC
genomic: GGGCAGGCACTCGACTCCAACCCCTCACTCTTCGCCGAGCAAAGCCAGCGgtaagcgatg ... tggtgaacagGTTCCACTTGGGGGTGGCTATCGATTGATCGATGTGCCCATGAGCAACTGC
aaaaacttatgtacaaccgggttggtttctctgacactcgccaattggtgaacagGTTCCACTTGGGGGTGGCTATCGATTGATCGATGTGCCCATGAGCAACTGCATTAACAGCGGGATTAACAAGATTTATGTTCTCACTCAGTTCAATTCTA
ctctgac putative branch site (score: 120)
ttatgta TA-rich tract