1 5' 3' | 2 5' 3' |
...acaacatgagtctgttgcttataaccccagaaaatgcagttgtttgtgcaatcgctctcggaaagtctgattaaacccgtctggtttttgtgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGATTACTGCCTTCATCATTGTGAGTGTCCCGTTATTGTTGTGAGGTTTCC
species | Physcomitrella patens |
transcript | PP1S98_214V6.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|208373484|gb|DC931901.1|DC931901
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162239278|gb|FC416521.1|FC416521
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|37839245|gb|BJ597253.1|BJ597253
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|208373949|gb|DC944682.1|DC944682
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|208367582|gb|DC943957.1|DC943957
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|37844423|gb|BJ602431.1|BJ602431
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|100396293|gb|BY990058.1|BY990058
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTANAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162207218|gb|FC382540.1|FC382540
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162271782|gb|FC448915.1|FC448915
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|37840221|gb|BJ598229.1|BJ598229
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|15261883|gb|BI437193.1|BI437193
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGGTGAGCGGCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162263590|gb|FC440100.1|FC440100
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162216213|gb|FC392630.1|FC392630
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162245832|gb|FC420473.1|FC420473
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|100431344|gb|BY960149.1|BY960149
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCEST: gi|37840816|gb|BJ598824.1|BJ598824
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTC
EST: TGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|208360624|gb|DC946404.1|DC946404
genomic: TGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162263563|gb|FC440099.1|FC440099
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162252229|gb|FC425907.1|FC425907
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|22132388|gb|BQ827128.1|BQ827128
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|18339851|gb|BJ171878.1|BJ171878
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: TTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162180414|gb|FC355835.1|FC355835
genomic: TTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162252228|gb|FC425906.1|FC425906
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162216212|gb|FC392629.1|FC392629
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162266202|gb|FC441731.1|FC441731
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|22492564|gb|BU052487.1|BU052487
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|208368926|gb|DC947484.1|DC947484
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: C-TGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|208395153|gb|DC923952.1|DC923952
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162245831|gb|FC420472.1|FC420472
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: TGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|208387483|gb|DC933346.1|DC933346
genomic: TGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGANGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCNAAG -TGTANGTGCTACAAGACGATCTCGTAAAGCTCGTCT-GGAANN-TCAGCGEST: gi|208363175|gb|DC954361.1|DC954361
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CNTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162239277|gb|FC416520.1|FC416520
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|162207217|gb|FC382539.1|FC382539
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGEST: gi|208396071|gb|DC924537.1|DC924537
genomic: CTTGGAGGTTGAGCGTCTTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
EST: TTGGAGTCAGTGCAATGATCATGGGAAGCCGAG GTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
genomic: TTGGAGTCAGTGCAATGATCATGGGAAGCCGAGgtaggggttt ... tgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCG
gtgcaatcgctctcggaaagtctgattaaacccgtctggtttttgtgcctggcagGTGTAGGTGCTACAAGACGATCTCGTAAAGCTCGTCTTGGAAGCGTCAGCGATTACTGCCTTCATCATTGTGAGTGTCCCGTTATTGTTGTGAGGTTTCC
gtctgat putative branch site (score: 4)
tttttgt putative PPT
tgattaaa TA-rich tract