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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGACGATTGTCGCTGCTAAAGCTACCAAGGAGGCTGAGGCCGCCGTGGACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgccatgtttgatcaatgtattttccactgtggtttaagctagcagtaattttcgaactttctcagaaggaggaagtagatcactttcctgtggttatgaacgagttagtcgtaacatgtgcggatcacgttggcaatttctgaaattgtggcttaaaattctcag

Basic information

species Physcomitrella patens
transcript PP1S98_136V6.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67578663|gb|BJ950830.1|BJ950830
EST:     CGAGACGAGCGCCGCCGNTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: CGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67574583|gb|BJ947407.1|BJ947407
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162262839|gb|FC438751.1|FC438751
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162216551|gb|FC392448.1|FC392448
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162269838|gb|FC445888.1|FC445888
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67701028|gb|BJ961261.1|BJ961261
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162263118|gb|FC439784.1|FC439784
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162276312|gb|FC452419.1|FC452419
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67700665|gb|BJ960898.1|BJ960898
EST:     ACGAGACGAGCGCCGCCGCTGAGGA-TTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67691902|gb|BJ952135.1|BJ952135
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162223989|gb|FC400347.1|FC400347
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67578873|gb|BJ951040.1|BJ951040
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67507607|gb|BJ940488.1|BJ940488
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162226370|gb|FC403286.1|FC403286
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162236290|gb|FC411409.1|FC411409
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67572078|gb|BJ944902.1|BJ944902
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|7583735|gb|AW699641.1|AW699641
EST:     AGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: AGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67571413|gb|BJ944237.1|BJ944237
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|15728457|gb|BI740797.1|BI740797
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|37847166|gb|BJ605174.1|BJ605174
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162202536|gb|FC380051.1|FC380051
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162226371|gb|FC403287.1|FC403287
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67508677|gb|BJ941538.1|BJ941538
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67694743|gb|BJ954976.1|BJ954976
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67578161|gb|BJ950328.1|BJ950328
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|19790227|gb|BQ041763.1|BQ041763
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67695443|gb|BJ955676.1|BJ955676
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162256658|gb|FC433176.1|FC433176
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67698000|gb|BJ958233.1|BJ958233
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67578455|gb|BJ950622.1|BJ950622
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67701356|gb|BJ961589.1|BJ961589
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162261462|gb|FC438298.1|FC438298
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67571784|gb|BJ944608.1|BJ944608
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162202537|gb|FC380052.1|FC380052
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|18366775|gb|BJ198854.1|BJ198854
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162210330|gb|FC386210.1|FC386210
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162246712|gb|FC424694.1|FC424694
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162269839|gb|FC445889.1|FC445889
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|162210329|gb|FC386209.1|FC386209
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
EST: gi|67695152|gb|BJ955385.1|BJ955385
EST:     ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCG                         TGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA
genomic: ACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgcc ... aaattctcagTGGGAGAAGTCGGATGATAAGCCCGCCATTGTTGGACTAGGATTTGCCGGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTTGACGATTGTCGCTGCTAAAGCTACCAAGGAGGCTGAGGCCGCCGTGGACGAGACGAGCGCCGCCGCTGAGGATTTTCTCCAGAGCTTGACGGAAGCGgtactgtgccatgtttgatcaatgtattttccactgtggtttaagctagcagtaattttcgaactttctcagaaggaggaagtagatcactttcctgtggttatgaacgagttagtcgtaacatgtgcggatcacgttggcaatttctgaaattgtggcttaaaattctcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT