1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
...tgaaacattttaaaaatatttttttgtacttcgtatcataatccataaaagctcgcttatatattggatctgactttttatgttcattattggtgaacagAGAGCAAATGACTTGGTTAGAAACAAGATACATCCAACTTCAATTATTAGTGGTTATCGA
species | Physcomitrella patens |
transcript | PP1S97_11V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TTGGAGATGGAACAACTTCGGTTGTTATTATTGCCGCGGAGCTTCTTAAG AGAGCAAATGACTTGGTTAGAAACAAGATACATCCAACTTCAATTATTAGTEST: gi|208375362|gb|DC936961.1|DC936961
genomic: TTGGAGATGGAACAACTTCGGTTGTTATTATTGCCGCGGAGCTTCTTAAGgttaatgaca ... tggtgaacagAGAGCAAATGACTTGGTTAGAAACAAGATACATCCAACTTCAATTATTAGT
EST: TTGGAGATGGAACAACTTCGGTTGTTATTATTGCCGCGGAGCTTCTTAAG AGAGCAAATGACTTGGTTAGAAACAAGATACATCCAACTTCAATTATTAGTEST: gi|100418690|gb|BY957542.1|BY957542
genomic: TTGGAGATGGAACAACTTCGGTTGTTATTATTGCCGCGGAGCTTCTTAAGgttaatgaca ... tggtgaacagAGAGCAAATGACTTGGTTAGAAACAAGATACATCCAACTTCAATTATTAGT
EST: TTGGAGATGGAACAACTTCGGTTGTTATTATTGCCGCGGAGCTTCTTAAG AGAGCAAATGACTTGGTTAGAAACAAGATACATCCAACTTCAATTATTAGT
genomic: TTGGAGATGGAACAACTTCGGTTGTTATTATTGCCGCGGAGCTTCTTAAGgttaatgaca ... tggtgaacagAGAGCAAATGACTTGGTTAGAAACAAGATACATCCAACTTCAATTATTAGT
taaaagctcgcttatatattggatctgactttttatgttcattattggtgaacagAGAGCAAATGACTTGGTTAGAAACAAGATACATCCAACTTCAATTATTAGTGGTTATCGA
atctgac putative branch site (score: 8)
tttttatgttcattat TA-rich tract