1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tcactttgtttatacgatatgtctgcctcatccacgactctcgtcgatatgaacgttagatttcgaattaattcttcttttttatcatttgcttgtgcagAGAAATTTGCGACTAGTGTTGTCGCAAGCGTACAAGTATCACAAGGACAGCATGAGCCTGTCTATTCAAGATTTATGTCAGGAAGGGGTGATAGGTCTTA
species | Physcomitrella patens |
transcript | PP1S92_33V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGCGTCGTCGACTTGCATTAGGCCGGGCAGCTCGGACTAAGCTTATTCAG AGAAATTTGCGACTAGTGTTGTCGCAAGCGTACAAGTATCACAAGGACAGCEST: gi|162152584|gb|FC328862.1|FC328862
genomic: TGCGTCGTCGACTTGCATTAGGCCGGGCAGCTCGGACTAAGCTTATTCAGgtcataggca ... gcttgtgcagAGAAATTTGCGACTAGTGTTGTCGCAAGCGTACAAGTATCACAAGGACAGC
EST: TGCGTCGTCGACTTGCATTAGGCCGGGCAGCTCGGACTAAGCTTATTCAG AGAAATTTGCGACTAGTGTTGTCGCAAGCGTACAAGTATCACAAGGACAGC
genomic: TGCGTCGTCGACTTGCATTAGGCCGGGCAGCTCGGACTAAGCTTATTCAGgtcataggca ... gcttgtgcagAGAAATTTGCGACTAGTGTTGTCGCAAGCGTACAAGTATCACAAGGACAGC
gatatgaacgttagatttcgaattaattcttcttttttatcatttgcttgtgcagAGAAATTTGCGACTAGTGTTGTCGCAAGCGTACAAGTATCACAAGGACAGCATGAGCCTGTCTATTCAAGATTTATGTCAGGAAGGGGTGATAGGTCTTA
aattaat putative branch site (score: 29)
ttcttcttttttatca CT-rich tract
aattaattcttctttt TA-rich tract