1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TGGCAAGAAGAAGAAAGGTGTTTTTCAGCACTCAAGCTTCTTAGCAGGAGGCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgttcgcttgaaacaggatgcttttttcattgccaaataaagtagatactagattggccgattcgtctcaatctgatatttgaagagttttaa...
species | Physcomitrella patens |
transcript | PP1S91_220V6.3 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAG CTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAGEST: gi|162151697|gb|FC327826.1|FC327826
genomic: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgt ... ttggtaatagCTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAG
EST: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAG CTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAGEST: gi|67726432|gb|BJ976691.1|BJ976691
genomic: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgt ... ttggtaatagCTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAG
EST: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAG CTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAGEST: gi|208350802|gb|DC925933.1|DC925933
genomic: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgt ... ttggtaatagCTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAG
EST: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAG CTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAGEST: gi|208390108|gb|DC945971.1|DC945971
genomic: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgt ... ttggtaatagCTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAG
EST: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAG CTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAGEST: gi|19778055|gb|BQ039251.1|BQ039251
genomic: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgt ... ttggtaatagCTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAG
EST: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAG CTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCEST: gi|162236369|gb|FC411488.1|FC411488
genomic: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgt ... ttggtaatagCTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGC
EST: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAG CTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAG
genomic: GCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgt ... ttggtaatagCTGATGGAAGCTCACAGTGGGCATTACCGGCCGAGCCCAGAGAATTTTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGCAAGAAGAAGAAAGGTGTTTTTCAGCACTCAAGCTTCTTAGCAGGAGGCGCCACGACTGCTGCCGGCCGCCTTGTCGTCAATCACGGAGTCTTAAAGgtaggaccgttcgcttgaaacaggatgcttttttcattgccaaataaagtagatactagattggccgattcgtctcaatctgatatttgaagagttttaa
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