1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagtagcactgctcctttgtttattttatttacaagaatggatctgaagataaactcaacgtgttaagggttgtctgttttaggaacctcagaaaaccattaactttgtggaatgtttgtgtcaagtactatgcgatgtgctaagatgtgagaagcgactctaaacttgtcctggtttgtgcgaccttgtacagAAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAAGACTTGGGTGGCAACCAAAGTACAATAGCTTCAAGGATTACGTTAGCAC
species | Physcomitrella patens |
transcript | PP1S91_170V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CATCATGATGCACAGTGGTAAATTTGCAGGAAATTTCCATGGATTCACTA AAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAAEST: gi|6167381|gb|AW145645.1|AW145645
genomic: CATCATGATGCACAGTGGTAAATTTGCAGGAAATTTCCATGGATTCACTAgtaagtagca ... ccttgtacagAAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAA
EST: CATCATGATGCACAGTGGTAAATTTGCAGGAAATTTCCATGGATTCACTA AAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAAEST: gi|15261388|gb|BI436698.1|BI436698
genomic: CATCATGATGCACAGTGGTAAATTTGCAGGAAATTTCCATGGATTCACTAgtaagtagca ... ccttgtacagAAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAA
EST: CATCATGATGCACAGTGGTAAATTTGCAGGAAATTTCCATGGATTCACTA AAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAAEST: gi|208395303|gb|DC915945.1|DC915945
genomic: CATCATGATGCACAGTGGTAAATTTGCAGGAAATTTCCATGGATTCACTAgtaagtagca ... ccttgtacagAAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAA
EST: CATCATGATGCACAGTGGTAAATTTGCAGGAAATTTCCATGGATTCACTA AAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAA
genomic: CATCATGATGCACAGTGGTAAATTTGCAGGAAATTTCCATGGATTCACTAgtaagtagca ... ccttgtacagAAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAA
gctaagatgtgagaagcgactctaaacttgtcctggtttgtgcgaccttgtacagAAAGTGATGGTCCTCTCGGGAAAAAGATGAATAACAGTCAAACTAGGGAAAGACTTGGGTGGCAACCAAAGTACAATAGCTTCAAGGATTACGTTAGCAC
ctctaaa putative branch site (score: 3)
taaactt TA-rich tract