1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AACGGTGGGAAAGTTCAAAAGAGAACGCACGGTAGCGTTGCCGTTGAATGCGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactacaaaacccttcaaaaaaaccacccgtatcggtaaacaatcctctagcttcggcgatgacaaagccattgtctgcgtgtgggttgtgcag
species | Physcomitrella patens |
transcript | PP1S77_270V6.2 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTG AATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATCEST: gi|37836265|gb|BJ594273.1|BJ594273
genomic: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactaca ... ggttgtgcagAATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATC
EST: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTG AATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATCEST: gi|162166560|gb|FC343257.1|FC343257
genomic: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactaca ... ggttgtgcagAATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATC
EST: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTG AATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATCEST: gi|162258655|gb|FC434350.1|FC434350
genomic: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactaca ... ggttgtgcagAATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATC
EST: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTG AATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATCEST: gi|37821505|gb|BJ579571.1|BJ579571
genomic: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactaca ... ggttgtgcagAATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATC
EST: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTG AATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATCEST: gi|162217362|gb|FC392830.1|FC392830
genomic: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactaca ... ggttgtgcagAATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATC
EST: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTG AATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATCEST: gi|162217361|gb|FC392829.1|FC392829
genomic: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactaca ... ggttgtgcagAATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATC
EST: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTG AATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATC
genomic: CGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactaca ... ggttgtgcagAATCATTTCACACGTACTACACCCACGTACCCGAACGGGAGCGAACAAATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACGGTGGGAAAGTTCAAAAGAGAACGCACGGTAGCGTTGCCGTTGAATGCGAGGGGCAGATCTGTGGGCAACATCGAAGTGGCTACCGAATTCACATTGgtaaactacaaaacccttcaaaaaaaccacccgtatcggtaaacaatcctctagcttcggcgatgacaaagccattgtctgcgtgtgggttgtgcag
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