1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ctgggtgttttggtaattggagaaggactacatgggtatgaacgcgttatcatgcaatgtttttgtgaagttttctgatatttttaggctttatgtgcagATAATTGCAGACCTTGCCCTGAAAATGGGATCTGTCGGGGCGGAGAATTGCGCTGTATTCCAGGTTTTCGACGTCAAGGCGCTCTATGTGTTCCTGACAA
species | Physcomitrella patens |
transcript | PP1S6_218V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGAGGAAGCGCGCCGGCCGTTCTGTGATGATCAGCAAGATCCCCTGCGAG ATAATTGCAGACCTTGCCCTGAAAATGGGATCTGTCGGGGCGGAGAATTGCEST: gi|100352152|gb|BY983062.1|BY983062
genomic: TGAGGAAGCGCGCCGGCCGTTCTGTGATGATCAGCAAGATCCCCTGCGAGgtgcaaacca ... ttatgtgcagATAATTGCAGACCTTGCCCTGAAAATGGGATCTGTCGGGGCGGAGAATTGC
EST: TGAGGAAGCGCGCCGGCCGTTCTGTGATGATCAGCAAGATCCCCTGCGAG ATAATTGCAGACCTTGCCCTGAAAATGGGATCTGTCGGGGCGGAGAATTGC
genomic: TGAGGAAGCGCGCCGGCCGTTCTGTGATGATCAGCAAGATCCCCTGCGAGgtgcaaacca ... ttatgtgcagATAATTGCAGACCTTGCCCTGAAAATGGGATCTGTCGGGGCGGAGAATTGC
gttatcatgcaatgtttttgtgaagttttctgatatttttaggctttatgtgcagATAATTGCAGACCTTGCCCTGAAAATGGGATCTGTCGGGGCGGAGAATTGCGCTGTATTCCAGGTTTTCGACGTCAAGGCGCTCTATGTGTTCCTGACAA
ttctgat putative branch site (score: 12)
ttttctgatattttta TA-rich tract