1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtacttgccatgtttgtgataatggctttcgtcaatgcagagtaattatttggtgccggtttttaaagttctgatgatatggtttttcacattttgaagttttgcacttggtctttgtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTTGCTTGGGC
species | Physcomitrella patens |
transcript | PP1S6_159V6.1 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAG CCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTEST: gi|162152879|gb|FC328973.1|FC328973
genomic: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAGgtacttgcca ... gtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
EST: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAG CCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTEST: gi|37849887|gb|BJ607895.1|BJ607895
genomic: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAGgtacttgcca ... gtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
EST: TGGGCATTGAG CCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTEST: gi|162189972|gb|FC365623.1|FC365623
genomic: TGGGCATTGAGgtacttgcca ... gtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
EST: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAG CCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTEST: gi|162156042|gb|FC332209.1|FC332209
genomic: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAGgtacttgcca ... gtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
EST: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAG CCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTEST: gi|162156984|gb|FC333346.1|FC333346
genomic: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAGgtacttgcca ... gtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
EST: GACTCTGGGCATTGAG CCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTEST: gi|162173249|gb|FC350031.1|FC350031
genomic: GACTCTGGGCATTGAGgtacttgcca ... gtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
EST: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAG CCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTEST: gi|208368650|gb|DC940029.1|DC940029
genomic: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAGgtacttgcca ... gtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
EST: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAG CCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
genomic: TTGGGTGCCGTGTCCAACACTGCTTCTTATCTGCGACTCTGGGCATTGAGgtacttgcca ... gtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTT
tgatgatatggtttttcacattttgaagttttgcacttggtctttgtgtatgcagCCTTGCACACGCACAACTTTCTGCGGTGTTCTATGAGCGAGTCCTCATGTTTGCTTGGGC
ttctgat putative branch site (score: 4)
tctttgt putative PPT
attttgaa TA-rich tract