1 5' 3' | 2 5' 3' | 3 5' 3' |
...gcagtttgtagccctcgcctcttcgcatggcgccagtggattatgaactgatttttgagaatctaaagcgtgatttctaacgtagagaggtgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCTGTGGACGACTGCTGGAGGTGTAGCAGCAATTGGGAAAGCAATCGTCAG
species | Physcomitrella patens |
transcript | PP1S563_1V6.3 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100435443|gb|BY979247.1|BY979247
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67717475|gb|BJ967734.1|BJ967734
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCCGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67709422|gb|BJ965238.1|BJ965238
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100384663|gb|BY950653.1|BY950653
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67703305|gb|BJ963538.1|BJ963538
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCCGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGEST: gi|100428757|gb|BY959418.1|BY959418
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAG
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100375322|gb|BY948839.1|BY948839
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100420010|gb|BY975932.1|BY975932
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100449025|gb|CJ973324.1|CJ973324
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100447253|gb|CJ971552.1|CJ971552
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100374662|gb|BY949011.1|BY949011
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100414562|gb|BY956753.1|BY956753
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67709991|gb|BJ965807.1|BJ965807
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100392845|gb|BY971910.1|BY971910
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CN--TC-AACAGTACCCGCCGCTCTCTGGGGAG-CTGTGGAACAGGCAACCEST: gi|100384009|gb|BY950395.1|BY950395
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGG-AGGCTGTGGAACAGGCAACC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67710240|gb|BJ965903.1|BJ965903
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTC-G --GCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100417441|gb|BY957332.1|BY957332
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCTCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100436673|gb|BY979468.1|BY979468
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100402839|gb|BY973377.1|BY973377
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100384825|gb|BY969560.1|BY969560
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG --GCTC-AACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|208350056|gb|DC910291.1|DC910291
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100433788|gb|BY960707.1|BY960707
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67717456|gb|BJ967715.1|BJ967715
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100378872|gb|BY968731.1|BY968731
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100373190|gb|BY949248.1|BY949248
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100388499|gb|BY952101.1|BY952101
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100360531|gb|BY984156.1|BY984156
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|208350272|gb|DC901628.1|DC901628
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|208345958|gb|DC901815.1|DC901815
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67704805|gb|BJ965038.1|BJ965038
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100371985|gb|BY967649.1|BY967649
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67717211|gb|BJ967470.1|BJ967470
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|208346699|gb|DC913345.1|DC913345
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100446132|gb|CJ970431.1|CJ970431
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100430630|gb|BY978316.1|BY978316
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100360224|gb|BY966077.1|BY966077
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100446147|gb|CJ970446.1|CJ970446
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100359145|gb|BY965613.1|BY965613
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100432505|gb|BY960490.1|BY960490
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100436306|gb|BY961151.1|BY961151
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGGACAGGCAACCCEST: gi|100449411|gb|CJ973710.1|CJ973710
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|67716183|gb|BJ966443.1|BJ966443
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100431972|gb|BY978600.1|BY978600
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100417898|gb|BY993239.1|BY993239
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100407971|gb|BY955859.1|BY955859
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG C---TCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCEST: gi|100414588|gb|BY956766.1|BY956766
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTNGGAGGCTGTGGAACAGGCAACCCEST: gi|100433093|gb|BY978806.1|BY978806
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
EST: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGG CAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
genomic: ACCCCCGTCGGAGTTGCAGAAAGCAAGGACGAAGAGCCTGCTGAACTCGGgtaagggagt ... tgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCC
aactgatttttgagaatctaaagcgtgatttctaacgtagagaggtgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCTGTGGACGACTGCTGGAGGTGTAGCAGCAATTGGGAAAGCAATCGTCAG
ttctaac putative branch site (score: 1)
atttttga TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gcagtttgtagccctcgcctcttcgcatggcgccagtggattatgaactgatttttgagaatctaaagcgtgatttctaacgtagagaggtgcaatgcagCAGCTCCAACAGTACCCGCCGCTCTCTGGGAGGCTGTGGAACAGGCAACCCTGTGGACGACTGCTGGAGGTGTAGCAGCAATTGGGAAAGCAATCGTCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA