Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGCCCACTCCGAGCTCGCTCTCTTTGCGTCTGTGCACCTGCTGCTGGACCCGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttctgtacattctacaagagtagtttttcccttcgcttcccaacggcatttgaatcgggtgctaaagctctagtgtgtgtgtgtgtgtatgtgt...

Basic information

species Physcomitrella patens
transcript PP1S505_8V6.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162264474|gb|FC441134.1|FC441134
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162207236|gb|FC383273.1|FC383273
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162211642|gb|FC387930.1|FC387930
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162263581|gb|FC439584.1|FC439584
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162207235|gb|FC383272.1|FC383272
EST:     TTGCCGCAGGCCTCACGCGTCCATNGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: TTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67701114|gb|BJ961347.1|BJ961347
EST:     TTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: TTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162215339|gb|FC391107.1|FC391107
EST:     CTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67508237|gb|BJ941107.1|BJ941107
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCANACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|18361796|gb|BJ193863.1|BJ193863
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67701278|gb|BJ961511.1|BJ961511
EST:     CGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|7046933|gb|AW476770.1|AW476770
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|18356467|gb|BJ188526.1|BJ188526
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67578246|gb|BJ950413.1|BJ950413
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|37835360|gb|BJ593372.1|BJ593372
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|208383426|gb|DC911178.1|DC911178
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67695859|gb|BJ956092.1|BJ956092
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162232418|gb|FC408839.1|FC408839
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162211308|gb|FC387538.1|FC387538
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67698696|gb|BJ958929.1|BJ958929
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|22131641|gb|BQ826718.1|BQ826718
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162263582|gb|FC439585.1|FC439585
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162207727|gb|FC383812.1|FC383812
EST:     GCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: GCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162280378|gb|FC456083.1|FC456083
EST:     CTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|37850552|gb|BJ608560.1|BJ608560
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162263988|gb|FC439231.1|FC439231
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162268358|gb|FC444127.1|FC444127
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67572588|gb|BJ945412.1|BJ945412
EST:     GTCCCCTCGTTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: GTCCCCTCG-TCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|18328628|gb|BJ160633.1|BJ160633
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67572487|gb|BJ945311.1|BJ945311
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162265536|gb|FC441044.1|FC441044
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|37845169|gb|BJ603177.1|BJ603177
EST:     TCTTTGCCGCAGGCNTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: TCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67572525|gb|BJ945349.1|BJ945349
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162207728|gb|FC383813.1|FC383813
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|18353888|gb|BJ185943.1|BJ185943
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162258010|gb|FC434104.1|FC434104
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162237366|gb|FC412669.1|FC412669
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162211309|gb|FC387539.1|FC387539
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67578387|gb|BJ950554.1|BJ950554
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|208355302|gb|DC929777.1|DC929777
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|208370937|gb|DC944312.1|DC944312
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67575237|gb|BJ948061.1|BJ948061
EST:     GATCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTTATCAGACGACTTGACCTGGTTGTTGGTCAAGAA
genomic: G-TCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGT-ATCAGACGACTTGACCTGGTTGTTGGTCAAGAA
EST: gi|162266388|gb|FC443243.1|FC443243
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|15728866|gb|BI741018.1|BI741018
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67695898|gb|BJ956131.1|BJ956131
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162201871|gb|FC377805.1|FC377805
EST:     GCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: GCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|67695962|gb|BJ956195.1|BJ956195
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
EST: gi|162280379|gb|FC456084.1|FC456084
EST:     CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAG                         GATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA
genomic: CGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 29 (upstream exon), 30 (downstream exon)
Score: 24

CGCCCACTCCGAGCTCGCTCTCTTTGCGTCTGTGCACCTGCTGCTGGACCCGTCCCCTCGTCTCTTTGCCGCAGGCCTCACGCGTCCATCGAATTTTCAGgttttcttct ... aaatgaccagGATGGCAGCTGTATCAGACGACTTGACCTGGTTGTTGGTCAAGAACAACAATAGGTTCTTGGTGAAGATGAATGGGAACAACAGCAACAGTGTTCAATTC




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