1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...gttaatcatcatcttttaatttctctagatatccgagtaatgcgattcctgtgtgagctccgataacagtggtgcccgtgtgtctcttattttaatgcagCTATTGGGATTTGTAGCTGAGGAGACCAGCGGCAAGTACCTGCACGATGGTGACTTCAGTGTTGACTCACTCAAG
species | Physcomitrella patens |
transcript | PP1S422_7V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGG CTATTGGGATTTGTAGCTGAGGAGACCAGCGGCAAGTACCTGCACGATGGTEST: gi|162218094|gb|FC394957.1|FC394957
genomic: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGGgtactttcct ... tttaatgcagCTATTGGGATTTGTAGCTGAGGAGACCAGCGGCAAGTACCTGCACGATGGT
EST: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGG CTATTGNGATTTGTAGCTGAGGAGACCAGCGGCAAGTACCTGCACGATGGTEST: gi|162170029|gb|FC345082.1|FC345082
genomic: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGGgtactttcct ... tttaatgcagCTATTGGGATTTGTAGCTGAGGAGACCAGCGGCAAGTACCTGCACGATGGT
EST: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGG CTATTGGGATTTGTAGCTGAGGAGACCAGCGGCAAGTACCTGCACGATGGTEST: gi|162167529|gb|FC344220.1|FC344220
genomic: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGGgtactttcct ... tttaatgcagCTATTGGGATTTGTAGCTGAGGAGACCAGCGGCAAGTACCTGCACGATGGT
EST: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGG CTATTGGGATTTGTAGCTGEST: gi|162198843|gb|FC372870.1|FC372870
genomic: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGGgtactttcct ... tttaatgcagCTATTGGGATTTGTAGCTG
EST: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGG CTATTGGGATTTGTAGCTG
genomic: TGGCCACTCCCGTTCTGGACTTCTTCGCACTTGACAGCGAGAAGACAAGGgtactttcct ... tttaatgcagCTATTGGGATTTGTAGCTG
ttcctgtgtgagctccgataacagtggtgcccgtgtgtctcttattttaatgcagCTATTGGGATTTGTAGCTGAGGAGACCAGCGGCAAGTACCTGCACGATGGTGACTTCAGTGTTGACTCACTCAAG
ttttaat putative branch site (score: 3)
tctcttatttt CT-rich tract
tctcttattttaat TA-rich tract